Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.23□□□□□ -1.41
HMGCLP35914 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.23□□□□□ -1.41
HMGCLP35914 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGCLP35914 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGCLP35914 BMS1P16-201ENST00000556075 1147 ntBASIC6.23□□□□□ -1.41
HMGCLP35914 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGCLP35914 SETP3-201ENST00000581726 813 ntBASIC6.23□□□□□ -1.41
HMGCLP35914 NPIPB1P-202ENST00000588786 828 ntBASIC6.23□□□□□ -1.41
HMGCLP35914 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGCLP35914 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGCLP35914 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGCLP35914 TMCC1P1-201ENST00000518897 1980 ntBASIC6.23□□□□□ -1.41
HMGCLP35914 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
HMGCLP35914 AOX3P-204ENST00000491025 2107 ntBASIC6.23□□□□□ -1.41
HMGCLP35914 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HMGCLP35914 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 AC096921.2-201ENST00000561507 1916 ntBASIC6.23□□□□□ -1.41
HMGCLP35914 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGCLP35914 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HMGCLP35914 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
HMGCLP35914 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCLP35914 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCLP35914 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCLP35914 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCLP35914 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCLP35914 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
HMGCLP35914 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCLP35914 RN7SKP86-201ENST00000410454 332 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AC116036.1-201ENST00000412199 367 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AC010086.1-201ENST00000437359 1052 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AL590004.3-202ENST00000445883 451 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AC005165.2-201ENST00000466070 380 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AC113367.2-201ENST00000505749 160 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCLP35914 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGCLP35914 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCLP35914 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGCLP35914 OR4H6P-201ENST00000563771 921 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AL078601.3-201ENST00000573303 535 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AP001823.1-201ENST00000604056 1003 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 RPSAP75-201ENST00000605848 301 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCLP35914 AL135999.3-201ENST00000610501 812 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCLP35914 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCLP35914 AC116667.2-201ENST00000641075 823 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGCLP35914 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HMGCLP35914 AC007114.2-201ENST00000576014 4281 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGCLP35914 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 CCNT2P1-201ENST00000423082 1315 ntBASIC6.22□□□□□ -1.41
HMGCLP35914 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGCLP35914 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.21□□□□□ -1.41
HMGCLP35914 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
HMGCLP35914 AL353763.1-201ENST00000624467 1628 ntBASIC6.21□□□□□ -1.41
HMGCLP35914 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.21□□□□□ -1.41
HMGCLP35914 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HMGCLP35914 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
HMGCLP35914 HDAC1P2-201ENST00000453661 1398 ntBASIC6.21□□□□□ -1.41
HMGCLP35914 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
HMGCLP35914 SHQ1P1-201ENST00000437111 1544 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCLP35914 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCLP35914 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HMGCLP35914 SNORA43.1-201ENST00000364863 140 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HMGCLP35914 RN7SKP144-201ENST00000411108 279 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 TMA16P2-201ENST00000413187 601 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 HMGA1P8-201ENST00000414130 321 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 RPL23AP18-201ENST00000416139 468 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 RPL7AP14-201ENST00000424041 802 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGCLP35914 YRDCP3-201ENST00000456507 480 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 RPL34P33-201ENST00000486062 334 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 EIF4E2P2-201ENST00000492033 736 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 AL117692.1-201ENST00000494283 713 ntBASIC6.21□□□□□ -1.42
HMGCLP35914 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGCLP35914 AC090958.1-201ENST00000511122 351 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms