Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 RNU1-59P-201ENST00000364829 162 ntBASIC5.94□□□□□ -1.46
HCN1O60741 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.94□□□□□ -1.46
HCN1O60741 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 MIR621-201ENST00000384919 96 ntBASIC5.94□□□□□ -1.46
HCN1O60741 AL360271.1-201ENST00000395679 510 ntBASIC5.94□□□□□ -1.46
HCN1O60741 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.94□□□□□ -1.46
HCN1O60741 RN7SKP86-201ENST00000410454 332 ntBASIC5.94□□□□□ -1.46
HCN1O60741 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 AC003989.1-201ENST00000434569 565 ntBASIC5.94□□□□□ -1.46
HCN1O60741 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.94□□□□□ -1.46
HCN1O60741 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.94□□□□□ -1.46
HCN1O60741 AC118758.1-202ENST00000454719 225 ntBASIC5.94□□□□□ -1.46
HCN1O60741 RPL23AP64-201ENST00000469465 435 ntBASIC5.94□□□□□ -1.46
HCN1O60741 RPL19P11-201ENST00000495944 589 ntBASIC5.94□□□□□ -1.46
HCN1O60741 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.94□□□□□ -1.46
HCN1O60741 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.94□□□□□ -1.46
HCN1O60741 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.94□□□□□ -1.46
HCN1O60741 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.94□□□□□ -1.46
HCN1O60741 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.94□□□□□ -1.46
HCN1O60741 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.94□□□□□ -1.46
HCN1O60741 U1.25-201ENST00000614085 162 ntBASIC5.94□□□□□ -1.46
HCN1O60741 uc_338.29-201ENST00000615099 168 ntBASIC5.94□□□□□ -1.46
HCN1O60741 U1.34-201ENST00000618578 162 ntBASIC5.94□□□□□ -1.46
HCN1O60741 U1.31-201ENST00000620022 160 ntBASIC5.94□□□□□ -1.46
HCN1O60741 AP001264.1-201ENST00000620602 703 ntBASIC5.94□□□□□ -1.46
HCN1O60741 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.94□□□□□ -1.46
HCN1O60741 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.94□□□□□ -1.46
HCN1O60741 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HCN1O60741 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HCN1O60741 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HCN1O60741 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.93□□□□□ -1.46
HCN1O60741 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.93□□□□□ -1.46
HCN1O60741 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.93□□□□□ -1.46
HCN1O60741 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.93□□□□□ -1.46
HCN1O60741 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 RN7SKP171-201ENST00000364417 303 ntBASIC5.93□□□□□ -1.46
HCN1O60741 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 RNA5SP115-201ENST00000411160 107 ntBASIC5.93□□□□□ -1.46
HCN1O60741 RPS17P17-201ENST00000419392 409 ntBASIC5.93□□□□□ -1.46
HCN1O60741 AL139158.1-201ENST00000424719 340 ntBASIC5.93□□□□□ -1.46
HCN1O60741 AC021876.1-201ENST00000425959 359 ntBASIC5.93□□□□□ -1.46
HCN1O60741 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HCN1O60741 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.93□□□□□ -1.46
HCN1O60741 EEF1B2P3-201ENST00000447718 678 ntBASIC5.93□□□□□ -1.46
HCN1O60741 AC093166.3-201ENST00000448785 303 ntBASIC5.93□□□□□ -1.46
HCN1O60741 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.93□□□□□ -1.46
HCN1O60741 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.93□□□□□ -1.46
HCN1O60741 AC135983.3-201ENST00000528049 1226 ntBASIC5.93□□□□□ -1.46
HCN1O60741 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.93□□□□□ -1.46
HCN1O60741 AC023968.1-201ENST00000560719 475 ntBASIC5.93□□□□□ -1.46
HCN1O60741 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.93□□□□□ -1.46
HCN1O60741 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.93□□□□□ -1.46
HCN1O60741 MIR3154-201ENST00000577829 84 ntBASIC5.93□□□□□ -1.46
HCN1O60741 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HCN1O60741 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HCN1O60741 AC026898.1-201ENST00000586404 571 ntBASIC5.93□□□□□ -1.46
HCN1O60741 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.93□□□□□ -1.46
HCN1O60741 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.93□□□□□ -1.46
HCN1O60741 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.93□□□□□ -1.46
HCN1O60741 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.93□□□□□ -1.46
HCN1O60741 AL031658.2-201ENST00000616850 651 ntBASIC5.93□□□□□ -1.46
HCN1O60741 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HCN1O60741 MIR6806-201ENST00000622141 64 ntBASIC5.93□□□□□ -1.46
HCN1O60741 AC009120.7-201ENST00000623452 780 ntBASIC5.93□□□□□ -1.46
HCN1O60741 AL162377.2-201ENST00000624532 337 ntBASIC5.93□□□□□ -1.46
HCN1O60741 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.93□□□□□ -1.46
HCN1O60741 CASC19-274ENST00000642018 970 ntBASIC5.93□□□□□ -1.46
HCN1O60741 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HCN1O60741 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 NEK2P2-201ENST00000438441 1338 ntBASIC5.93□□□□□ -1.46
HCN1O60741 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.93□□□□□ -1.46
HCN1O60741 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 NR1H5P-201ENST00000452683 1377 ntBASIC5.93□□□□□ -1.46
HCN1O60741 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HCN1O60741 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HCN1O60741 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.92□□□□□ -1.46
HCN1O60741 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HCN1O60741 CAP1P2-201ENST00000417455 1409 ntBASIC5.92□□□□□ -1.46
HCN1O60741 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HCN1O60741 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HCN1O60741 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.92□□□□□ -1.46
HCN1O60741 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.92□□□□□ -1.46
HCN1O60741 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
HCN1O60741 VN1R12P-201ENST00000403778 876 ntBASIC5.92□□□□□ -1.46
HCN1O60741 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.92□□□□□ -1.46
HCN1O60741 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms