Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AC024595.1-201ENST00000623088 387 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL356266.1-201ENST00000623311 483 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.55□□□□□ -1.36
SHISA3A0PJX4 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.55□□□□□ -1.36
SHISA3A0PJX4 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC107980.1-201ENST00000558671 3355 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 ZNF101P1-201ENST00000435701 1720 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 IL6STP1-201ENST00000346911 1020 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 MIR640-201ENST00000385086 96 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 MIR498-201ENST00000385134 124 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 RPS27AP11-201ENST00000402798 447 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL357084.1-201ENST00000407538 454 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 FKBP1AP3-201ENST00000423650 319 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC005040.1-201ENST00000437783 482 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC092170.1-201ENST00000440211 356 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC097499.1-201ENST00000444277 208 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 CEACAMP5-201ENST00000448037 961 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL035407.2-201ENST00000454090 378 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 RN7SL834P-201ENST00000461450 286 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC026336.1-201ENST00000466577 351 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 CCDC75P1-201ENST00000469247 791 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC126182.1-201ENST00000478134 357 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC037198.2-201ENST00000478845 733 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC004069.2-201ENST00000505438 1114 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC026782.2-201ENST00000510845 636 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 HSD3BP4-201ENST00000511509 1120 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC108120.2-201ENST00000512973 294 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 RPS20-204ENST00000519606 424 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 ATP6V1G1P2-201ENST00000522436 346 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC005230.1-201ENST00000555418 285 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AL049870.4-201ENST00000555741 486 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 IGHV1OR15-4-201ENST00000560037 348 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHISA3A0PJX4 AP001542.2-201ENST00000593141 364 ntBASIC6.54□□□□□ -1.36
SHISA3A0PJX4 U73023.1-201ENST00000603134 700 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms