Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 MIR4489-201ENST00000578869 62 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 MIR4776-2-201ENST00000580204 80 ntBASIC7.78□□□□□ -1.16
SCN11AQ9UI33 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCN11AQ9UI33 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.77□□□□□ -1.16
SCN11AQ9UI33 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
SCN11AQ9UI33 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
SCN11AQ9UI33 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 FAM32BP-201ENST00000344033 333 ntBASIC7.77□□□□□ -1.17
SCN11AQ9UI33 SDHDP6-201ENST00000414693 480 ntBASIC7.77□□□□□ -1.17
SCN11AQ9UI33 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 CUBNP2-201ENST00000443534 1139 ntBASIC7.77□□□□□ -1.17
SCN11AQ9UI33 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 RN7SKP288-201ENST00000516227 268 ntBASIC7.77□□□□□ -1.17
SCN11AQ9UI33 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 AC020765.1-201ENST00000604296 328 ntBASIC7.77□□□□□ -1.17
SCN11AQ9UI33 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 AL391261.1-201ENST00000555712 1479 ntBASIC7.77□□□□□ -1.17
SCN11AQ9UI33 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 AL359976.1-201ENST00000418655 3528 ntBASIC7.77□□□□□ -1.17
SCN11AQ9UI33 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
SCN11AQ9UI33 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC126120.1-201ENST00000431082 470 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AL663074.2-201ENST00000440621 479 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC011742.2-201ENST00000443818 352 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 OR13K1P-201ENST00000444577 975 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC103563.5-201ENST00000455643 364 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 RPS3AP15-201ENST00000483874 781 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC244502.2-201ENST00000543361 851 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 TXNP4-201ENST00000575018 310 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 RBPJP7-201ENST00000442803 1447 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 RBPJP5-201ENST00000449433 1447 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC053481.2-202ENST00000582394 1500 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 MIR1178-201ENST00000408396 91 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 PTCD2P2-201ENST00000415579 1095 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 IGKV2-19-201ENST00000518132 283 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 SALL4P7-201ENST00000555779 3120 ntBASIC7.76□□□□□ -1.17
SCN11AQ9UI33 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
SCN11AQ9UI33 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 AL391262.1-201ENST00000556558 1992 ntBASIC7.75□□□□□ -1.17
SCN11AQ9UI33 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.75□□□□□ -1.17
SCN11AQ9UI33 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms