Protein–RNA interactions for Protein: Q9BYR5

KRTAP4-2, Keratin-associated protein 4-2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-2Q9BYR5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SULT1A2-201ENST00000335715 1090 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 URM1-201ENST00000372847 753 ntTSL 3 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MOG-217ENST00000376891 889 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SNORA80B-201ENST00000383906 136 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SNORA18.3-201ENST00000384122 132 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MIR301A-201ENST00000385261 86 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 U3.30-201ENST00000391308 210 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 RPS26P42-201ENST00000413485 326 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC245291.1-201ENST00000419501 328 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC006450.1-201ENST00000421041 460 ntTSL 3 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC074389.2-201ENST00000421380 437 ntTSL 3 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 Z98752.2-201ENST00000432727 312 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 ATP6V1G1P4-201ENST00000438388 335 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AL356133.1-201ENST00000444762 372 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AL445189.2-201ENST00000447543 259 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 LILRB1-AS1-201ENST00000456337 554 ntTSL 4 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 snoU109.2-201ENST00000459316 135 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 TPI1P2-201ENST00000491343 752 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 RN7SL313P-201ENST00000497618 288 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC016632.1-201ENST00000503994 196 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC010409.2-201ENST00000505780 478 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC016924.1-201ENST00000511512 501 ntTSL 3 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 DDX4-212ENST00000514278 2451 ntTSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 RNU6-1270P-201ENST00000517128 108 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC093367.1-201ENST00000517332 420 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MCU-204ENST00000536019 3224 ntTSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 NT5CP1-201ENST00000554092 509 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 GRAMD4P5-201ENST00000557243 761 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 TREML3P-202ENST00000564680 978 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC009086.1-201ENST00000567219 309 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 APOC1P1-202ENST00000571466 253 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MIR2681-201ENST00000581814 105 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SH3GL1P2-201ENST00000582245 1082 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 snoZ6.3-201ENST00000583496 76 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SIGLEC21P-201ENST00000598990 1010 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 CR382285.1-202ENST00000604687 547 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MIR6770-3-201ENST00000616362 60 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 GALNTL6-207ENST00000616459 1254 ntTSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MIR6749-201ENST00000617008 69 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MIR6770-2-201ENST00000618304 60 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 MIR6770-1-201ENST00000622248 60 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 U6.108-201ENST00000637764 58 ntBASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SFTPB-207ENST00000519937 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP4-2Q9BYR5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms