Protein–RNA interactions for Protein: Q03468

ERCC6, DNA excision repair protein ERCC-6, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6Q03468 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ERCC6Q03468 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
ERCC6Q03468 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ERCC6Q03468 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
ERCC6Q03468 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ERCC6Q03468 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
ERCC6Q03468 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
ERCC6Q03468 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC10.45□□□□□ -0.74
ERCC6Q03468 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC10.45□□□□□ -0.74
ERCC6Q03468 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ERCC6Q03468 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
ERCC6Q03468 AL096829.1-201ENST00000413677 457 ntBASIC10.45□□□□□ -0.74
ERCC6Q03468 SLC35E1P1-201ENST00000419313 864 ntBASIC10.45□□□□□ -0.74
ERCC6Q03468 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC10.45□□□□□ -0.74
ERCC6Q03468 CDK7P1-201ENST00000434574 693 ntBASIC10.45□□□□□ -0.74
ERCC6Q03468 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC10.45□□□□□ -0.74
ERCC6Q03468 AC022215.1-201ENST00000481770 362 ntBASIC10.45□□□□□ -0.74
ERCC6Q03468 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC10.45□□□□□ -0.74
ERCC6Q03468 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC10.45□□□□□ -0.74
ERCC6Q03468 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC10.45□□□□□ -0.74
ERCC6Q03468 AC008115.3-201ENST00000614874 549 ntBASIC10.45□□□□□ -0.74
ERCC6Q03468 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC10.45□□□□□ -0.74
ERCC6Q03468 AC131009.3-201ENST00000621809 287 ntBASIC10.45□□□□□ -0.74
ERCC6Q03468 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC10.45□□□□□ -0.74
ERCC6Q03468 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
ERCC6Q03468 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC10.45□□□□□ -0.74
ERCC6Q03468 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ERCC6Q03468 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ERCC6Q03468 AC008555.1-201ENST00000561778 2757 ntBASIC10.45□□□□□ -0.74
ERCC6Q03468 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
ERCC6Q03468 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC10.45□□□□□ -0.74
ERCC6Q03468 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC10.45□□□□□ -0.74
ERCC6Q03468 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ERCC6Q03468 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ERCC6Q03468 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC10.45□□□□□ -0.74
ERCC6Q03468 AC007938.2-201ENST00000604666 2634 ntBASIC10.45□□□□□ -0.74
ERCC6Q03468 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
ERCC6Q03468 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC10.45□□□□□ -0.74
ERCC6Q03468 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC10.44□□□□□ -0.74
ERCC6Q03468 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC10.44□□□□□ -0.74
ERCC6Q03468 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ERCC6Q03468 SNORA43.1-201ENST00000364863 140 ntBASIC10.44□□□□□ -0.74
ERCC6Q03468 CYB5AP4-201ENST00000396692 399 ntBASIC10.44□□□□□ -0.74
ERCC6Q03468 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC10.44□□□□□ -0.74
ERCC6Q03468 RPL36P18-201ENST00000419316 318 ntBASIC10.44□□□□□ -0.74
ERCC6Q03468 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC10.44□□□□□ -0.74
ERCC6Q03468 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC10.44□□□□□ -0.74
ERCC6Q03468 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC10.44□□□□□ -0.74
ERCC6Q03468 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ERCC6Q03468 AC137768.1-201ENST00000549998 553 ntBASIC10.44□□□□□ -0.74
ERCC6Q03468 AC079075.1-201ENST00000559543 878 ntBASIC10.44□□□□□ -0.74
ERCC6Q03468 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC10.44□□□□□ -0.74
ERCC6Q03468 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC10.44□□□□□ -0.74
ERCC6Q03468 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC10.44□□□□□ -0.74
ERCC6Q03468 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC10.44□□□□□ -0.74
ERCC6Q03468 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ERCC6Q03468 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
ERCC6Q03468 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
ERCC6Q03468 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
ERCC6Q03468 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ERCC6Q03468 AL139384.2-201ENST00000613809 3590 ntBASIC10.44□□□□□ -0.74
ERCC6Q03468 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC10.44□□□□□ -0.74
ERCC6Q03468 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
ERCC6Q03468 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ERCC6Q03468 MITF-203ENST00000328528 4680 ntTSL 5 BASIC10.44□□□□□ -0.74
ERCC6Q03468 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
ERCC6Q03468 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
ERCC6Q03468 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ERCC6Q03468 RNU1-106P-201ENST00000384382 164 ntBASIC10.43□□□□□ -0.74
ERCC6Q03468 AL355375.1-201ENST00000405686 392 ntBASIC10.43□□□□□ -0.74
ERCC6Q03468 ING3-204ENST00000431467 1447 ntTSL 2 BASIC10.43□□□□□ -0.74
ERCC6Q03468 HMGB3P24-201ENST00000433260 622 ntBASIC10.43□□□□□ -0.74
ERCC6Q03468 PA2G4P6-201ENST00000438325 1197 ntBASIC10.43□□□□□ -0.74
ERCC6Q03468 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC10.43□□□□□ -0.74
ERCC6Q03468 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC10.43□□□□□ -0.74
ERCC6Q03468 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC10.43□□□□□ -0.74
ERCC6Q03468 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC10.43□□□□□ -0.74
ERCC6Q03468 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC10.43□□□□□ -0.74
ERCC6Q03468 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
ERCC6Q03468 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
ERCC6Q03468 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
ERCC6Q03468 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ERCC6Q03468 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC10.43□□□□□ -0.74
ERCC6Q03468 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
ERCC6Q03468 AP005139.1-201ENST00000580702 1647 ntBASIC10.43□□□□□ -0.74
ERCC6Q03468 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
ERCC6Q03468 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC10.43□□□□□ -0.74
ERCC6Q03468 AC006058.1-201ENST00000568686 5067 ntBASIC10.43□□□□□ -0.74
ERCC6Q03468 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
ERCC6Q03468 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
ERCC6Q03468 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ERCC6Q03468 USP46-202ENST00000451218 4622 ntTSL 5 BASIC10.43□□□□□ -0.74
ERCC6Q03468 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC10.43□□□□□ -0.74
ERCC6Q03468 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC10.43□□□□□ -0.74
ERCC6Q03468 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ERCC6Q03468 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ERCC6Q03468 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ERCC6Q03468 AC013442.1-201ENST00000397347 228 ntBASIC10.42□□□□□ -0.74
ERCC6Q03468 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC10.42□□□□□ -0.74
ERCC6Q03468 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms