Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL353626.3-201ENST00000413399 657 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 VN1R3-201ENST00000418822 919 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 NPM1P23-201ENST00000440193 849 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC4P56524 AL031681.1-201ENST00000443304 400 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 AC026616.1-201ENST00000523157 525 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC4P56524 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 RPL3P13-201ENST00000550415 216 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.71□□□□□ -1.34
HDAC4P56524 HMGN2P47-201ENST00000559378 272 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 AC023389.2-201ENST00000580031 955 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 MIR4732-201ENST00000581873 76 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 SYPL1P2-201ENST00000582878 727 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 RN7SL475P-201ENST00000583379 298 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 AC090616.1-201ENST00000583895 447 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
HDAC4P56524 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.71□□□□□ -1.34
HDAC4P56524 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 DOCK11P1-201ENST00000553480 5932 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
HDAC4P56524 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.71□□□□□ -1.34
HDAC4P56524 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.7□□□□□ -1.34
HDAC4P56524 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 U3.43-201ENST00000410734 213 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC4P56524 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 OR6R1P-201ENST00000431838 940 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 UBE2V2P1-201ENST00000434717 398 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC4P56524 AL445991.1-201ENST00000450381 475 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC4P56524 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.7□□□□□ -1.34
HDAC4P56524 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC4P56524 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 DPPA3P2-202ENST00000557188 1219 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 MIR3157-201ENST00000578688 85 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.7□□□□□ -1.34
HDAC4P56524 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 GAPDHP41-201ENST00000613707 975 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 AL132640.3-201ENST00000630473 177 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
HDAC4P56524 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC105235.1-201ENST00000623208 1816 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.7□□□□□ -1.34
HDAC4P56524 AC217777.1-201ENST00000570034 1471 ntBASIC6.7□□□□□ -1.34
HDAC4P56524 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
HDAC4P56524 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HDAC4P56524 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HDAC4P56524 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.69□□□□□ -1.34
HDAC4P56524 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
HDAC4P56524 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HDAC4P56524 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
HDAC4P56524 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HDAC4P56524 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HDAC4P56524 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.69□□□□□ -1.34
HDAC4P56524 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.69□□□□□ -1.34
HDAC4P56524 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HDAC4P56524 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.69□□□□□ -1.34
HDAC4P56524 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms