Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 IGHVIII-13-1-201ENST00000517613 291 ntBASIC7.55□□□□□ -1.2
NUP98P52948 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.55□□□□□ -1.2
NUP98P52948 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.55□□□□□ -1.2
NUP98P52948 AC119403.2-201ENST00000590960 598 ntBASIC7.55□□□□□ -1.2
NUP98P52948 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.55□□□□□ -1.2
NUP98P52948 AC104695.2-201ENST00000605056 775 ntBASIC7.55□□□□□ -1.2
NUP98P52948 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NUP98P52948 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.55□□□□□ -1.2
NUP98P52948 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.54□□□□□ -1.2
NUP98P52948 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.54□□□□□ -1.2
NUP98P52948 AC126120.1-201ENST00000431082 470 ntBASIC7.54□□□□□ -1.2
NUP98P52948 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 LYPLA1P1-201ENST00000434514 622 ntBASIC7.54□□□□□ -1.2
NUP98P52948 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 RN7SL799P-201ENST00000475891 298 ntBASIC7.54□□□□□ -1.2
NUP98P52948 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 OR4A40P-201ENST00000533878 948 ntBASIC7.54□□□□□ -1.2
NUP98P52948 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.54□□□□□ -1.2
NUP98P52948 AC073916.1-201ENST00000545095 130 ntBASIC7.54□□□□□ -1.2
NUP98P52948 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.54□□□□□ -1.2
NUP98P52948 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.54□□□□□ -1.2
NUP98P52948 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 FAM27E4-201ENST00000605259 342 ntBASIC7.54□□□□□ -1.2
NUP98P52948 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 AL049767.1-202ENST00000637826 242 ntBASIC7.54□□□□□ -1.2
NUP98P52948 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 CCNT2P1-201ENST00000423082 1315 ntBASIC7.54□□□□□ -1.2
NUP98P52948 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
NUP98P52948 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NUP98P52948 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.53□□□□□ -1.2
NUP98P52948 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.53□□□□□ -1.2
NUP98P52948 AC011504.1-201ENST00000623331 4103 ntBASIC7.53□□□□□ -1.2
NUP98P52948 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 AL391422.1-201ENST00000402155 436 ntBASIC7.53□□□□□ -1.2
NUP98P52948 MIR1178-201ENST00000408396 91 ntBASIC7.53□□□□□ -1.2
NUP98P52948 OR3A2-201ENST00000408891 1076 ntBASIC7.53□□□□□ -1.2
NUP98P52948 RN7SKP278-201ENST00000410504 342 ntBASIC7.53□□□□□ -1.2
NUP98P52948 AL445928.1-201ENST00000435545 222 ntBASIC7.53□□□□□ -1.2
NUP98P52948 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.53□□□□□ -1.2
NUP98P52948 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.53□□□□□ -1.2
NUP98P52948 AL136038.1-201ENST00000497246 351 ntBASIC7.53□□□□□ -1.2
NUP98P52948 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.53□□□□□ -1.2
NUP98P52948 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.53□□□□□ -1.2
NUP98P52948 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.53□□□□□ -1.2
NUP98P52948 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
NUP98P52948 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.53□□□□□ -1.2
NUP98P52948 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 CDY5P-201ENST00000411487 1580 ntBASIC7.53□□□□□ -1.2
NUP98P52948 CDY9P-201ENST00000451397 1580 ntBASIC7.53□□□□□ -1.2
NUP98P52948 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.53□□□□□ -1.2
NUP98P52948 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 RBPJP7-201ENST00000442803 1447 ntBASIC7.53□□□□□ -1.2
NUP98P52948 RBPJP5-201ENST00000449433 1447 ntBASIC7.53□□□□□ -1.2
NUP98P52948 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
NUP98P52948 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NUP98P52948 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
NUP98P52948 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.52□□□□□ -1.2
NUP98P52948 HMGB1P20-201ENST00000402555 677 ntBASIC7.52□□□□□ -1.2
NUP98P52948 AC016739.1-201ENST00000405359 345 ntBASIC7.52□□□□□ -1.2
NUP98P52948 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.52□□□□□ -1.2
NUP98P52948 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.52□□□□□ -1.2
NUP98P52948 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
NUP98P52948 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.52□□□□□ -1.2
NUP98P52948 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.52□□□□□ -1.2
NUP98P52948 UBA52P7-201ENST00000486088 380 ntBASIC7.52□□□□□ -1.2
NUP98P52948 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
NUP98P52948 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.52□□□□□ -1.2
NUP98P52948 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.52□□□□□ -1.2
NUP98P52948 AC027308.1-201ENST00000517993 110 ntBASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms