Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 H3F3BP1-201ENST00000440551 403 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 AL355355.1-201ENST00000442900 793 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 SNX18P26-201ENST00000458433 740 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 RN7SL83P-201ENST00000468131 297 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 RN7SKP248-201ENST00000516278 305 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.25□□□□□ -1.41
HNF4AP41235 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 AC084851.2-201ENST00000530377 364 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 AC073916.1-201ENST00000545095 130 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AC026956.1-201ENST00000558741 396 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.25□□□□□ -1.41
HNF4AP41235 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 AC092718.4-201ENST00000566639 716 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.25□□□□□ -1.41
HNF4AP41235 AC233702.7-202ENST00000582941 211 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.25□□□□□ -1.41
HNF4AP41235 AC019257.2-201ENST00000605539 497 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 SNORA35B-201ENST00000607417 129 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 MIR6085-201ENST00000618314 110 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AC087821.1-201ENST00000623639 567 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.25□□□□□ -1.41
HNF4AP41235 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 AC079753.1-201ENST00000623243 3868 ntBASIC6.25□□□□□ -1.41
HNF4AP41235 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.25□□□□□ -1.41
HNF4AP41235 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HNF4AP41235 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.25□□□□□ -1.41
HNF4AP41235 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.24□□□□□ -1.41
HNF4AP41235 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.24□□□□□ -1.41
HNF4AP41235 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.24□□□□□ -1.41
HNF4AP41235 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HNF4AP41235 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 AC005261.6-201ENST00000623072 1387 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.24□□□□□ -1.41
HNF4AP41235 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HNF4AP41235 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.24□□□□□ -1.41
HNF4AP41235 SNORA70H-201ENST00000383910 135 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 SNORA70J-201ENST00000384182 135 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.24□□□□□ -1.41
HNF4AP41235 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.24□□□□□ -1.41
HNF4AP41235 BMP6P1-201ENST00000431230 679 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 AL022324.2-201ENST00000434827 780 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 AC092601.1-201ENST00000444526 383 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HNF4AP41235 AC091544.1-201ENST00000484702 348 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 PPP1R11P1-201ENST00000486095 376 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HNF4AP41235 MRPS5P3-201ENST00000515577 166 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.24□□□□□ -1.41
HNF4AP41235 IGKV1D-22-201ENST00000518953 324 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 AP003080.1-202ENST00000526526 915 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 AP005639.1-201ENST00000526939 192 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 AC130364.2-201ENST00000528639 604 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.24□□□□□ -1.41
HNF4AP41235 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
HNF4AP41235 AC005899.6-201ENST00000620729 297 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 AC021422.1-201ENST00000621212 473 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.24□□□□□ -1.41
HNF4AP41235 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.24□□□□□ -1.41
HNF4AP41235 SAGE3P-201ENST00000619800 1635 ntBASIC6.24□□□□□ -1.41
HNF4AP41235 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HNF4AP41235 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HNF4AP41235 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.23□□□□□ -1.41
HNF4AP41235 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms