Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.24□□□□□ -1.25
POLR2AP24928 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.24□□□□□ -1.25
POLR2AP24928 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
POLR2AP24928 AC105114.1-201ENST00000624795 1862 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 MTCO1P8-201ENST00000416914 1523 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
POLR2AP24928 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.23□□□□□ -1.25
POLR2AP24928 AC025470.1-201ENST00000510053 2032 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.23□□□□□ -1.25
POLR2AP24928 RNA5SP443-201ENST00000363083 132 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 AC127526.2-201ENST00000426436 775 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.23□□□□□ -1.25
POLR2AP24928 VN1R110P-201ENST00000438988 971 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 AC016027.4-201ENST00000450866 277 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 OTX2P1-201ENST00000450956 354 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 TAAR4P-201ENST00000454843 1039 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
POLR2AP24928 OR4A46P-201ENST00000527255 933 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC7.23□□□□□ -1.25
POLR2AP24928 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.23□□□□□ -1.25
POLR2AP24928 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.23□□□□□ -1.25
POLR2AP24928 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
POLR2AP24928 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.23□□□□□ -1.25
POLR2AP24928 MFSD8-217ENST00000641178 4374 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 AC061975.7-201ENST00000592016 2692 ntBASIC7.23□□□□□ -1.25
POLR2AP24928 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.23□□□□□ -1.25
POLR2AP24928 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
POLR2AP24928 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.23□□□□□ -1.25
POLR2AP24928 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC7.23□□□□□ -1.25
POLR2AP24928 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
POLR2AP24928 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC7.23□□□□□ -1.25
POLR2AP24928 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
POLR2AP24928 RNU105B-201ENST00000364478 208 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC007386.1-201ENST00000455212 582 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AC138866.2-201ENST00000508650 584 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 GAPDHP71-201ENST00000511530 1003 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AC074087.1-201ENST00000512059 724 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.22□□□□□ -1.25
POLR2AP24928 OR6M2P-201ENST00000529831 871 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC7.22□□□□□ -1.25
POLR2AP24928 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC092574.1-201ENST00000609771 420 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AC068870.2-201ENST00000620635 389 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AC073592.7-201ENST00000623659 507 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AC004808.2-201ENST00000627965 773 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 OR7A1P-202ENST00000641542 1158 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.22□□□□□ -1.25
POLR2AP24928 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 AL023284.3-201ENST00000407767 334 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.22□□□□□ -1.25
POLR2AP24928 AL662874.1-201ENST00000426065 230 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC073594.1-201ENST00000462065 364 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AL133445.1-201ENST00000467051 452 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 RPS23P1-201ENST00000491662 432 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.22□□□□□ -1.25
POLR2AP24928 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 AC007620.3-201ENST00000608131 497 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 CU639417.4-201ENST00000623928 207 ntBASIC7.22□□□□□ -1.25
POLR2AP24928 AC106730.3-201ENST00000624568 641 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms