Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC013476.2-201ENST00000614456 459 ntBASIC7.69□□□□□ -1.18
NFKB1P19838 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NFKB1P19838 AL121873.1-201ENST00000616013 524 ntBASIC7.69□□□□□ -1.18
NFKB1P19838 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC7.69□□□□□ -1.18
NFKB1P19838 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC7.69□□□□□ -1.18
NFKB1P19838 AC092794.2-201ENST00000620933 563 ntBASIC7.69□□□□□ -1.18
NFKB1P19838 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.69□□□□□ -1.18
NFKB1P19838 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.69□□□□□ -1.18
NFKB1P19838 SEPT14P19-203ENST00000633205 211 ntBASIC7.69□□□□□ -1.18
NFKB1P19838 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NFKB1P19838 AC092447.7-201ENST00000422212 1621 ntBASIC7.69□□□□□ -1.18
NFKB1P19838 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.69□□□□□ -1.18
NFKB1P19838 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NFKB1P19838 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NFKB1P19838 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NFKB1P19838 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NFKB1P19838 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.69□□□□□ -1.18
NFKB1P19838 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NFKB1P19838 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.69□□□□□ -1.18
NFKB1P19838 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
NFKB1P19838 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.69□□□□□ -1.18
NFKB1P19838 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
NFKB1P19838 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
NFKB1P19838 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NFKB1P19838 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NFKB1P19838 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.69□□□□□ -1.18
NFKB1P19838 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.69□□□□□ -1.18
NFKB1P19838 CASC19-205ENST00000641013 1411 ntBASIC7.69□□□□□ -1.18
NFKB1P19838 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NFKB1P19838 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.69□□□□□ -1.18
NFKB1P19838 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 NXF4-202ENST00000416098 1465 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 AL591543.1-202ENST00000642095 4149 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
NFKB1P19838 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC069222.1-201ENST00000608028 3360 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 OR51A10P-201ENST00000307165 937 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NFKB1P19838 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 RNU6-114P-201ENST00000384704 105 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 MIR498-201ENST00000385134 124 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NFKB1P19838 RNA5SP18-201ENST00000390935 121 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 RAB5CP1-201ENST00000395972 580 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 NUS1P4-201ENST00000401550 585 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.68□□□□□ -1.18
NFKB1P19838 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 RPL5P6-201ENST00000425640 886 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC130472.1-201ENST00000427885 309 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 PYHIN5P-201ENST00000431627 723 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 AL358876.1-201ENST00000453364 1075 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 SNX18P27-201ENST00000523611 779 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 BTG1P1-201ENST00000540396 508 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AL121579.1-201ENST00000555129 305 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NFKB1P19838 AC037479.1-201ENST00000558361 625 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AC084757.1-201ENST00000559987 490 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.68□□□□□ -1.18
NFKB1P19838 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.68□□□□□ -1.18
NFKB1P19838 BNIP3P33-201ENST00000598912 569 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AL021918.1-201ENST00000603933 236 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AC007038.2-201ENST00000608095 740 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AC139769.3-201ENST00000618383 175 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AP003068.4-201ENST00000623192 802 ntBASIC7.68□□□□□ -1.18
NFKB1P19838 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms