Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC074141.1-201ENST00000588129 2995 ntBASIC5.64□□□□□ -1.51
FREM3P0C091 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
FREM3P0C091 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.64□□□□□ -1.51
FREM3P0C091 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FREM3P0C091 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FREM3P0C091 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FREM3P0C091 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
FREM3P0C091 AC008627.1-201ENST00000517511 1704 ntBASIC5.64□□□□□ -1.51
FREM3P0C091 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
FREM3P0C091 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
FREM3P0C091 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FREM3P0C091 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.63□□□□□ -1.51
FREM3P0C091 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
FREM3P0C091 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 SNORA70H-201ENST00000383910 135 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 SNORA70J-201ENST00000384182 135 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC069154.1-201ENST00000432914 542 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 ATP5LP2-201ENST00000440646 311 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.63□□□□□ -1.51
FREM3P0C091 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.63□□□□□ -1.51
FREM3P0C091 LSM3P4-201ENST00000502948 309 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.63□□□□□ -1.51
FREM3P0C091 MIR4502-201ENST00000580432 81 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC020916.2-201ENST00000591242 360 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 AC124916.2-201ENST00000604416 224 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.63□□□□□ -1.51
FREM3P0C091 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC105235.1-201ENST00000623208 1816 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.63□□□□□ -1.51
FREM3P0C091 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC027575.3-201ENST00000583058 2747 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
FREM3P0C091 OR11H13P-201ENST00000359695 979 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 SNORD16-201ENST00000362803 99 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
FREM3P0C091 SNORA77.2-201ENST00000408571 112 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 RPS7P14-201ENST00000426405 583 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 CDY8P-201ENST00000428380 1279 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 CDY20P-201ENST00000447528 1279 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 RPL23AP60-201ENST00000450011 454 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 VN1R38P-201ENST00000450265 887 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 PPIAP7-201ENST00000454070 489 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 VPS25P1-201ENST00000455691 508 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.63□□□□□ -1.51
FREM3P0C091 FTH1P8-201ENST00000498161 514 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.63□□□□□ -1.51
FREM3P0C091 MAST4-IT1-201ENST00000514241 658 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.63□□□□□ -1.51
FREM3P0C091 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 AP000620.1-201ENST00000527147 504 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
FREM3P0C091 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.63□□□□□ -1.51
FREM3P0C091 AC067773.1-201ENST00000603284 1094 ntBASIC5.63□□□□□ -1.51
FREM3P0C091 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.63□□□□□ -1.51
FREM3P0C091 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.63□□□□□ -1.51
FREM3P0C091 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FREM3P0C091 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
FREM3P0C091 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.62□□□□□ -1.51
FREM3P0C091 OR2AH1P-202ENST00000641232 2744 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FREM3P0C091 RN7SKP187-201ENST00000365536 330 ntBASIC5.62□□□□□ -1.51
FREM3P0C091 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
FREM3P0C091 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms