Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
PDGFAP04085 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.4□□□□□ -1.23
PDGFAP04085 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PDGFAP04085 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
PDGFAP04085 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC7.4□□□□□ -1.23
PDGFAP04085 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PDGFAP04085 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.4□□□□□ -1.23
PDGFAP04085 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PDGFAP04085 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.39□□□□□ -1.23
PDGFAP04085 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 RPL10P16-201ENST00000325000 645 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 Y_RNA.18-201ENST00000362461 102 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.39□□□□□ -1.23
PDGFAP04085 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 PKMP3-201ENST00000405497 715 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 SNX18P13-201ENST00000412442 529 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC013404.1-201ENST00000413068 249 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.39□□□□□ -1.23
PDGFAP04085 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.39□□□□□ -1.23
PDGFAP04085 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.39□□□□□ -1.23
PDGFAP04085 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.39□□□□□ -1.23
PDGFAP04085 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC7.39□□□□□ -1.23
PDGFAP04085 MGAT2P2-201ENST00000427194 797 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.39□□□□□ -1.23
PDGFAP04085 GAPDHP34-201ENST00000432112 823 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.39□□□□□ -1.23
PDGFAP04085 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.39□□□□□ -1.23
PDGFAP04085 AL353093.1-201ENST00000441292 436 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AL590004.3-202ENST00000445883 451 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC023271.1-201ENST00000445936 1090 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC239798.1-201ENST00000449024 1176 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 DDX39BP2-208ENST00000453923 258 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.39□□□□□ -1.23
PDGFAP04085 AC116353.2-201ENST00000505332 712 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC090071.1-201ENST00000507713 644 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.39□□□□□ -1.23
PDGFAP04085 AC006499.4-201ENST00000510947 694 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 RFPL4AP3-201ENST00000515267 345 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 FABP5P5-201ENST00000515537 406 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.39□□□□□ -1.23
PDGFAP04085 AC083923.1-201ENST00000523708 376 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AP004607.5-201ENST00000532034 217 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.39□□□□□ -1.23
PDGFAP04085 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.39□□□□□ -1.23
PDGFAP04085 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.39□□□□□ -1.23
PDGFAP04085 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 FRG2IP-201ENST00000563581 781 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 MIR4666A-201ENST00000580160 79 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 OR4K7P-201ENST00000580232 945 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC090616.1-201ENST00000583895 447 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.39□□□□□ -1.23
PDGFAP04085 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 AC243772.3-202ENST00000609662 1148 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 AC023158.2-201ENST00000614876 543 ntBASIC7.39□□□□□ -1.23
PDGFAP04085 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PDGFAP04085 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.39□□□□□ -1.23
PDGFAP04085 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC7.39□□□□□ -1.23
PDGFAP04085 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDGFAP04085 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.39□□□□□ -1.23
PDGFAP04085 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC7.38□□□□□ -1.23
PDGFAP04085 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 NSRP1P1-201ENST00000444067 1693 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.38□□□□□ -1.23
PDGFAP04085 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDGFAP04085 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.38□□□□□ -1.23
PDGFAP04085 MARK2P10-201ENST00000454959 1437 ntBASIC7.38□□□□□ -1.23
PDGFAP04085 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms