Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SHOX2O60902 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 AL359091.1-201ENST00000449048 1734 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.2□□□□□ -1.42
SHOX2O60902 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.2□□□□□ -1.42
SHOX2O60902 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHOX2O60902 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHOX2O60902 AC023886.2-201ENST00000321285 411 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHOX2O60902 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHOX2O60902 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SHOX2O60902 MIR323B-201ENST00000385269 82 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SHOX2O60902 AL391419.1-201ENST00000398901 1275 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 AC099535.1-201ENST00000408928 371 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.2□□□□□ -1.42
SHOX2O60902 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC6.2□□□□□ -1.42
SHOX2O60902 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.2□□□□□ -1.42
SHOX2O60902 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.2□□□□□ -1.42
SHOX2O60902 KATNBL1P2-201ENST00000433311 835 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 RPS23P9-201ENST00000448848 438 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 MORF4L2P1-201ENST00000503761 858 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 RNA5SP230-201ENST00000517039 122 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.2□□□□□ -1.42
SHOX2O60902 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 SSU72P6-201ENST00000532644 488 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.2□□□□□ -1.42
SHOX2O60902 AL359219.2-201ENST00000555184 348 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.2□□□□□ -1.42
SHOX2O60902 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 AC010503.3-201ENST00000594355 540 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 AC245052.7-201ENST00000601161 359 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 AC024451.4-201ENST00000602578 752 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 AL031429.2-201ENST00000602605 649 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 pRNA.9-201ENST00000618609 89 ntBASIC6.2□□□□□ -1.42
SHOX2O60902 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
SHOX2O60902 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.2□□□□□ -1.42
SHOX2O60902 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHOX2O60902 AC004656.1-201ENST00000568479 4951 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SHOX2O60902 AC125336.1-201ENST00000508893 2827 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHOX2O60902 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHOX2O60902 AC024587.1-201ENST00000505925 2157 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHOX2O60902 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.19□□□□□ -1.42
SHOX2O60902 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.19□□□□□ -1.42
SHOX2O60902 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHOX2O60902 RN7SKP279-201ENST00000411383 298 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 PTCD2P2-201ENST00000415579 1095 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 SNRPEP5-201ENST00000425442 278 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.19□□□□□ -1.42
SHOX2O60902 GAPDHP14-201ENST00000450472 937 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 RAB28P2-201ENST00000454299 641 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.19□□□□□ -1.42
SHOX2O60902 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.19□□□□□ -1.42
SHOX2O60902 OR4C1P-201ENST00000530880 937 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.19□□□□□ -1.42
SHOX2O60902 MIR4428-201ENST00000584884 73 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.19□□□□□ -1.42
SHOX2O60902 AL583832.1-201ENST00000603227 784 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 MIR6883-201ENST00000614952 78 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 AC007786.3-201ENST00000615154 596 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC6.19□□□□□ -1.42
SHOX2O60902 AC119674.1-217ENST00000641942 1086 ntBASIC6.19□□□□□ -1.42
SHOX2O60902 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHOX2O60902 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHOX2O60902 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHOX2O60902 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHOX2O60902 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHOX2O60902 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHOX2O60902 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.19□□□□□ -1.42
SHOX2O60902 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 AC063923.1-201ENST00000478982 1619 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHOX2O60902 RNA5SP114-201ENST00000363780 113 ntBASIC6.18□□□□□ -1.42
SHOX2O60902 AC087752.1-201ENST00000391360 558 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms