Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP99D6REC4 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP99D6REC4 AC106872.5-201ENST00000508856 1416 ntBASIC8.26□□□□□ -1.09
CFAP99D6REC4 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.26□□□□□ -1.09
CFAP99D6REC4 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.26□□□□□ -1.09
CFAP99D6REC4 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
CFAP99D6REC4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP99D6REC4 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC8.26□□□□□ -1.09
CFAP99D6REC4 ZNF101P1-201ENST00000435701 1720 ntBASIC8.26□□□□□ -1.09
CFAP99D6REC4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CFAP99D6REC4 OR51E1-202ENST00000530215 2942 ntBASIC8.26□□□□□ -1.09
CFAP99D6REC4 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP99D6REC4 AC006058.1-201ENST00000568686 5067 ntBASIC8.26□□□□□ -1.09
CFAP99D6REC4 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CFAP99D6REC4 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CFAP99D6REC4 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AL133320.1-201ENST00000621423 2352 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC061975.7-201ENST00000592016 2692 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 RN7SKP48-201ENST00000365031 328 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 RNU6-297P-201ENST00000384636 107 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 HIST1H2BPS2-201ENST00000402707 340 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 GLRX3P2-201ENST00000405027 1038 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 FAT1P1-201ENST00000406588 507 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 SDCBPP3-201ENST00000419629 891 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC008850.1-201ENST00000427546 362 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC007683.1-201ENST00000432746 591 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 OSTCP2-201ENST00000437956 444 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 SFTPA3P-201ENST00000446429 367 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 RPL39P6-201ENST00000448289 150 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC096915.1-201ENST00000456185 512 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 snoU109.1-201ENST00000459339 135 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 RN7SL130P-201ENST00000489463 305 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC114964.1-201ENST00000502306 1111 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC027338.2-201ENST00000504382 526 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC114786.4-201ENST00000508771 728 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 RNA5SP101-201ENST00000517036 108 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 GTF2IP8-201ENST00000560687 584 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC092133.1-201ENST00000565828 719 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 MIR3680-2-201ENST00000578247 87 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 MIR3680-1-201ENST00000581433 87 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC013553.3-201ENST00000612943 615 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC010338.1-201ENST00000621823 717 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC012078.1-201ENST00000405035 1646 ntBASIC8.25□□□□□ -1.09
CFAP99D6REC4 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.25□□□□□ -1.09
CFAP99D6REC4 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CFAP99D6REC4 AC110998.1-201ENST00000519029 2053 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 267.1 ms