Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 RN7SKP166-201ENST00000410812 305 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 AC091390.2-201ENST00000432573 374 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 HMGB3P24-201ENST00000433260 622 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 BX284632.1-201ENST00000478218 541 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 OR51K1P-201ENST00000510214 950 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 AC147055.3-201ENST00000510547 851 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 RN7SKP66-201ENST00000516681 231 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 FKBP1AP1-201ENST00000594588 318 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 PPATP2-201ENST00000605635 508 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.67□□□□□ -1.18
RGPD3A6NKT7 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RGPD3A6NKT7 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC004453.1-201ENST00000487895 408 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC141002.1-201ENST00000607025 279 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC105342.1-201ENST00000378334 6848 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC112255.1-201ENST00000624070 2493 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 TMEM75-201ENST00000624314 2165 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 RNA5SP333-201ENST00000363466 118 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 RNA5SP334-201ENST00000364825 118 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AL139128.1-201ENST00000413921 941 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 MGAT2P1-201ENST00000449718 797 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC008629.2-201ENST00000503783 483 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 SUGT1P3-202ENST00000604259 383 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AL359513.1-201ENST00000614364 557 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AL731566.2-201ENST00000618971 317 ntBASIC7.66□□□□□ -1.18
RGPD3A6NKT7 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RGPD3A6NKT7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 SPATA31C2-201ENST00000324915 3777 ntBASIC7.65□□□□□ -1.18
RGPD3A6NKT7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 AC005042.1-201ENST00000393397 800 ntBASIC7.65□□□□□ -1.18
RGPD3A6NKT7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC7.65□□□□□ -1.18
RGPD3A6NKT7 DUTP4-201ENST00000424782 475 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms