Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 CTAGE3P-201ENST00000454280 2404 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 RPL23AP59-201ENST00000399415 461 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 PRELID1P1-201ENST00000403549 660 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 RN7SKP129-201ENST00000410288 299 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC023128.2-201ENST00000420880 1223 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 CUBNP2-201ENST00000443534 1139 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AL050341.1-201ENST00000447743 313 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC234781.3-201ENST00000452540 973 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC092754.2-201ENST00000463506 460 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 RN7SL751P-201ENST00000473281 284 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 RN7SL88P-201ENST00000480166 299 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 NDUFB4P12-201ENST00000513465 390 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 RNA5SP318-201ENST00000516352 92 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC011445.2-201ENST00000599274 173 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 OSTC-205ENST00000613215 876 ntTSL 2 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC098679.5-201ENST00000624394 571 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TMEM88BA6NKF7 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC126773.4-201ENST00000612545 3043 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC012360.3-201ENST00000610036 3449 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 MTCO1P11-201ENST00000429111 1528 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 RN7SKP275-201ENST00000364626 301 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 RNU6-549P-201ENST00000384433 107 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 GCNT1P4-201ENST00000404096 329 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AL138880.1-201ENST00000405824 642 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AL512422.1-201ENST00000407033 553 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC246680.2-201ENST00000422106 389 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC006065.1-201ENST00000422539 802 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 FO393419.3-201ENST00000428741 282 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC007327.1-201ENST00000447461 264 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 MTCYBP20-201ENST00000524239 1129 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC024909.2-201ENST00000553035 286 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC023968.1-201ENST00000560719 475 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms