Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 AC022106.1-201ENST00000612834 766 ntBASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 AC024255.1-201ENST00000614376 102 ntBASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 AL359742.1-201ENST00000622497 540 ntBASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 AC006511.3-201ENST00000624929 1783 ntBASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HMG20BQ9P0W2 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 Z93929.1-201ENST00000418200 1475 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 LINC01616-201ENST00000561816 2280 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AC007568.1-201ENST00000422912 471 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AC115283.1-201ENST00000427353 400 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 MORF4-201ENST00000447135 971 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AC090115.2-201ENST00000548060 883 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AC009120.3-201ENST00000563335 499 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AP001437.1-201ENST00000608783 456 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AC073389.3-201ENST00000609434 935 ntBASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HMG20BQ9P0W2 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AL354854.1-201ENST00000455940 1363 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 RNU1-49P-201ENST00000363468 159 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 RNA5SP478-201ENST00000364657 115 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 SNORA51.9-201ENST00000384295 124 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 SNORA11.3-201ENST00000408471 128 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 UBE2V1P14-201ENST00000415815 558 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC023141.3-201ENST00000436698 278 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 HMGN1P2-201ENST00000445197 310 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC092967.1-201ENST00000449016 481 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 PPIAP7-201ENST00000454070 489 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC010343.2-201ENST00000510162 224 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AP000620.1-201ENST00000527147 504 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 SNORA11.6-201ENST00000619030 128 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC025262.3-201ENST00000623666 360 ntBASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.61□□□□□ -1.19
HMG20BQ9P0W2 AC007998.4-201ENST00000612496 2533 ntBASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 PPIAP10-201ENST00000438675 458 ntBASIC7.6□□□□□ -1.19
HMG20BQ9P0W2 OR13K1P-201ENST00000444577 975 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms