Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC022164.1-201ENST00000568767 2673 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC119674.1-202ENST00000641333 1860 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 MIR551B-201ENST00000384984 96 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 RPL6P21-201ENST00000418672 846 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AC010086.1-201ENST00000437359 1052 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AC106822.1-201ENST00000502647 526 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AC116917.1-201ENST00000520558 305 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AP001000.1-201ENST00000526843 742 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 MIR5010-201ENST00000582846 120 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AP005136.2-201ENST00000583253 1049 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 SMIM12P1-201ENST00000603004 274 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 AP001823.1-201ENST00000604056 1003 ntBASIC6.59□□□□□ -1.35
SIX2Q9NPC8 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.59□□□□□ -1.35
SIX2Q9NPC8 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
SIX2Q9NPC8 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SIX2Q9NPC8 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.36
SIX2Q9NPC8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SIX2Q9NPC8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AC022325.1-201ENST00000502748 2199 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 GNG5P2-201ENST00000372054 207 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AL139805.1-201ENST00000407837 289 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 RN7SKP38-201ENST00000410782 309 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AL691447.1-201ENST00000419456 387 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 RPS15AP30-201ENST00000420976 390 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 RPL7AP51-201ENST00000422016 760 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 IGLV3-4-201ENST00000432300 244 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 RPL23AP60-201ENST00000450011 454 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 HMGN1P17-201ENST00000513734 295 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AC021269.1-201ENST00000526860 705 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 MIR4701-201ENST00000583094 63 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AC007603.3-201ENST00000636915 979 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 AC010325.3-201ENST00000641084 394 ntBASIC6.58□□□□□ -1.36
SIX2Q9NPC8 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SIX2Q9NPC8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms