Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC012254.3-201ENST00000591183 2117 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC103987.1-201ENST00000473394 348 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC021269.1-201ENST00000526860 705 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC025171.4-201ENST00000607250 1047 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 RN7SL544P-201ENST00000617232 284 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 RN7SL763P-201ENST00000620922 284 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 MTCO1P25-201ENST00000414449 1799 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC104837.1-201ENST00000444644 1587 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC091046.3-201ENST00000631455 1574 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD8Q9HCK8 AC131971.1-201ENST00000332881 1482 ntBASIC5.8□□□□□ -1.48
CHD8Q9HCK8 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AC013442.1-201ENST00000397347 228 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 SEPT14P12-201ENST00000442280 560 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 LRRC37A14P-201ENST00000452297 462 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 MRE11P1-201ENST00000464884 2127 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 RN7SL382P-201ENST00000482631 282 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AC105233.1-201ENST00000498840 781 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AC005840.5-201ENST00000619166 599 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 MIR6837-201ENST00000620884 64 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AP002370.1-201ENST00000528055 1602 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 MITF-203ENST00000328528 4680 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AC022325.1-201ENST00000502748 2199 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AC010624.4-201ENST00000597606 1351 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 RPL7P61-201ENST00000451721 751 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 SCARNA6.1-201ENST00000516989 238 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 HMGN2P36-201ENST00000529541 409 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AC005332.4-201ENST00000592752 579 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AC010998.3-201ENST00000613871 631 ntBASIC5.79□□□□□ -1.48
CHD8Q9HCK8 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHD8Q9HCK8 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 SNORD16-201ENST00000362803 99 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AL355375.1-201ENST00000405686 392 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 MTND6P1-201ENST00000417434 424 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 SUMO2P10-201ENST00000452006 288 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AC135721.2-201ENST00000464237 300 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 RPL7P39-201ENST00000481157 744 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 PARP1P2-201ENST00000556806 195 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AL356986.1-201ENST00000604085 341 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms