Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL359694.1-201ENST00000403247 604 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AL139100.1-201ENST00000408001 498 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC098592.2-201ENST00000413158 265 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC000089.1-201ENST00000424559 801 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 NFYAP1-201ENST00000431953 972 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 TREML3P-201ENST00000457327 501 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 RPL5P16-201ENST00000471467 790 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 RN7SL165P-201ENST00000477476 291 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC093815.1-201ENST00000508637 280 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC096661.1-201ENST00000515870 822 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AP005902.2-201ENST00000518393 307 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 IGHV3-57-201ENST00000520143 280 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 RBMS2P1-201ENST00000525031 1226 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 SETP17-201ENST00000534163 817 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 MIR4312-201ENST00000579909 76 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 PTCHD3P1-201ENST00000612350 537 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC005393.1-201ENST00000617916 584 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC012653.2-201ENST00000621880 420 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC096921.2-201ENST00000561507 1916 ntBASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHRDL1Q9BU40 AC095038.1-201ENST00000429248 1591 ntBASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 UBBP1-201ENST00000392399 473 ntBASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 AL079341.1-201ENST00000404701 1207 ntBASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 AL049697.3-201ENST00000406493 982 ntBASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 AL136100.1-201ENST00000407696 330 ntBASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 RN7SKP296-201ENST00000411185 341 ntBASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 RPLP1P10-201ENST00000413972 339 ntBASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 VN1R31P-201ENST00000417498 730 ntBASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRDL1Q9BU40 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms