Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 SNORD56.2-201ENST00000363242 71 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 GAPDHP49-201ENST00000421421 961 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 NPM1P22-201ENST00000427761 952 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 CDC42P2-201ENST00000448566 569 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 ALG13-211ENST00000473389 693 ntTSL 2 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 RPS29P25-201ENST00000481709 171 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC108078.3-201ENST00000502633 489 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 FGF7P4-201ENST00000509595 295 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 BTG4P1-201ENST00000510421 183 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AP001189.2-201ENST00000527320 189 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 RN7SL237P-201ENST00000580912 287 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 MIR4795-201ENST00000584182 89 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 RPL35AP25-201ENST00000584631 330 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC005899.6-201ENST00000620729 297 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AF121897.1-201ENST00000411867 3980 ntBASIC8.58□□□□□ -1.04
PHOX2BQ99453 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.58□□□□□ -1.04
PHOX2BQ99453 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHOX2BQ99453 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 HSPD1P1-201ENST00000503199 1726 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 AC015689.2-201ENST00000528172 1738 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 RNU6-878P-201ENST00000384578 110 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 RNA5SP105-201ENST00000391123 113 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 PHBP1-201ENST00000392260 808 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 LDHAP4-201ENST00000397561 998 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHOX2BQ99453 OR2W4P-201ENST00000406496 926 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 RPLP1P10-201ENST00000413972 339 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 AC093084.1-201ENST00000424233 687 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 SNRPGP6-201ENST00000451124 220 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 AC092570.2-201ENST00000452117 1143 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 AC004692.1-201ENST00000455430 424 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC8.57□□□□□ -1.04
PHOX2BQ99453 AC105910.1-201ENST00000482585 483 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 AC021678.1-201ENST00000505195 936 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 AC112225.1-201ENST00000508230 297 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 RNU7-179P-201ENST00000516608 68 ntBASIC8.57□□□□□ -1.04
PHOX2BQ99453 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms