Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 AC010132.4-201ENST00000569883 1368 ntBASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 AC087203.2-201ENST00000526502 1587 ntBASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.05□□□□□ -1.12
FOXR1Q6PIV2 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TYMSP1-201ENST00000407851 869 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 ISCA1P1-201ENST00000426679 387 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 RN7SL146P-201ENST00000472338 297 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 NENFP3-201ENST00000503735 313 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC010198.2-201ENST00000550612 259 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC233290.2-201ENST00000552852 390 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC233699.1-201ENST00000569955 1168 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC112220.3-201ENST00000605502 502 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC093388.1-201ENST00000609166 430 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC008443.7-201ENST00000622195 246 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AL450226.2-201ENST00000622913 439 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 MIR3120-201ENST00000636555 81 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 MTND4P12-201ENST00000498999 1377 ntBASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
FOXR1Q6PIV2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 PWRN1-212ENST00000569908 1435 ntBASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 MAPK10-383ENST00000642032 3390 ntBASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 OR9M1P-202ENST00000641564 3163 ntBASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 RNU4-21P-201ENST00000362802 126 ntBASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 Y_RNA.535-201ENST00000384612 99 ntBASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 SNORD115-47-201ENST00000391226 86 ntBASIC8.03□□□□□ -1.12
FOXR1Q6PIV2 OR4F7P-201ENST00000402444 931 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms