Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 AC110716.2-201ENST00000563865 3945 ntBASIC6.23□□□□□ -1.41
CD40P25942 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 RNA5SP114-201ENST00000363780 113 ntBASIC6.23□□□□□ -1.41
CD40P25942 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CD40P25942 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 SFR1P1-201ENST00000403720 688 ntBASIC6.23□□□□□ -1.41
CD40P25942 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.23□□□□□ -1.41
CD40P25942 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 RPL5P4-201ENST00000434805 886 ntBASIC6.23□□□□□ -1.41
CD40P25942 PHB2P1-201ENST00000434943 890 ntBASIC6.23□□□□□ -1.41
CD40P25942 MTND4P32-201ENST00000437189 1237 ntBASIC6.23□□□□□ -1.41
CD40P25942 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CD40P25942 AC096632.2-201ENST00000438139 1239 ntBASIC6.23□□□□□ -1.41
CD40P25942 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 AC092685.1-201ENST00000447960 1243 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC093166.3-201ENST00000448785 303 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 CALM1P2-201ENST00000452941 448 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 AL133480.2-201ENST00000456723 487 ntBASIC6.23□□□□□ -1.41
CD40P25942 RPSAP7-201ENST00000456871 885 ntBASIC6.23□□□□□ -1.41
CD40P25942 RPLP0P1-201ENST00000457002 361 ntBASIC6.23□□□□□ -1.41
CD40P25942 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 WBP1LP1-201ENST00000460451 896 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC096922.1-201ENST00000461635 651 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC117395.2-201ENST00000463122 1128 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 RPSAP48-201ENST00000466509 889 ntBASIC6.23□□□□□ -1.41
CD40P25942 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 RPL10P7-201ENST00000495649 625 ntBASIC6.23□□□□□ -1.41
CD40P25942 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 ST13P6-201ENST00000522430 1102 ntBASIC6.23□□□□□ -1.41
CD40P25942 HMGB1P1-201ENST00000522557 636 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.23□□□□□ -1.41
CD40P25942 AP001803.1-201ENST00000525668 147 ntBASIC6.23□□□□□ -1.41
CD40P25942 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 AL356057.1-201ENST00000533798 831 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.23□□□□□ -1.41
CD40P25942 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.23□□□□□ -1.41
CD40P25942 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 AC092718.4-201ENST00000566639 716 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC015688.2-201ENST00000584523 262 ntBASIC6.23□□□□□ -1.41
CD40P25942 OR7E19P-202ENST00000589942 844 ntBASIC6.23□□□□□ -1.41
CD40P25942 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 AC010620.1-201ENST00000601088 1102 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC092032.1-201ENST00000603090 165 ntBASIC6.23□□□□□ -1.41
CD40P25942 AL645933.2-201ENST00000606743 1207 ntBASIC6.23□□□□□ -1.41
CD40P25942 AL445423.1-201ENST00000609941 536 ntBASIC6.23□□□□□ -1.41
CD40P25942 AC009237.15-201ENST00000610252 501 ntBASIC6.23□□□□□ -1.41
CD40P25942 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.23□□□□□ -1.41
CD40P25942 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 AC120338.1-201ENST00000625074 1541 ntBASIC6.23□□□□□ -1.41
CD40P25942 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.23□□□□□ -1.41
CD40P25942 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.23□□□□□ -1.41
CD40P25942 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CD40P25942 AC005261.2-201ENST00000593427 4258 ntBASIC6.22□□□□□ -1.41
CD40P25942 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.22□□□□□ -1.41
CD40P25942 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CD40P25942 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CD40P25942 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CD40P25942 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms