Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 RN7SKP29-201ENST00000410957 272 ntBASIC10.32□□□□□ -0.76
CFTRP13569 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 AC113412.1-201ENST00000425840 504 ntBASIC10.32□□□□□ -0.76
CFTRP13569 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC10.32□□□□□ -0.76
CFTRP13569 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC10.32□□□□□ -0.76
CFTRP13569 AL157777.1-201ENST00000468100 304 ntBASIC10.32□□□□□ -0.76
CFTRP13569 RN7SL583P-201ENST00000475692 287 ntBASIC10.32□□□□□ -0.76
CFTRP13569 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC10.32□□□□□ -0.76
CFTRP13569 HMGB1P42-201ENST00000532126 553 ntBASIC10.32□□□□□ -0.76
CFTRP13569 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC10.32□□□□□ -0.76
CFTRP13569 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC10.32□□□□□ -0.76
CFTRP13569 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC10.32□□□□□ -0.76
CFTRP13569 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC10.32□□□□□ -0.76
CFTRP13569 AL445222.1-201ENST00000607259 628 ntBASIC10.32□□□□□ -0.76
CFTRP13569 AC008115.4-201ENST00000619780 775 ntBASIC10.32□□□□□ -0.76
CFTRP13569 AC012254.5-201ENST00000623573 478 ntBASIC10.32□□□□□ -0.76
CFTRP13569 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CFTRP13569 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
CFTRP13569 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC10.32□□□□□ -0.76
CFTRP13569 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC10.32□□□□□ -0.76
CFTRP13569 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC10.32□□□□□ -0.76
CFTRP13569 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 TANK-205ENST00000405852 2155 ntTSL 5 BASIC10.32□□□□□ -0.76
CFTRP13569 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CFTRP13569 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CFTRP13569 SALL4P7-201ENST00000555779 3120 ntBASIC10.32□□□□□ -0.76
CFTRP13569 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
CFTRP13569 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CFTRP13569 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
CFTRP13569 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CFTRP13569 AC136624.1-201ENST00000400791 413 ntBASIC10.31□□□□□ -0.76
CFTRP13569 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CFTRP13569 FRG2FP-204ENST00000453982 852 ntBASIC10.31□□□□□ -0.76
CFTRP13569 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CFTRP13569 HIGD1AP14-201ENST00000507617 282 ntBASIC10.31□□□□□ -0.76
CFTRP13569 OR56A7P-201ENST00000524865 941 ntBASIC10.31□□□□□ -0.76
CFTRP13569 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.31□□□□□ -0.76
CFTRP13569 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC10.31□□□□□ -0.76
CFTRP13569 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC10.31□□□□□ -0.76
CFTRP13569 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CFTRP13569 AL512329.2-201ENST00000607350 548 ntBASIC10.31□□□□□ -0.76
CFTRP13569 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC10.31□□□□□ -0.76
CFTRP13569 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
CFTRP13569 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CFTRP13569 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
CFTRP13569 CREM-217ENST00000439705 2306 ntTSL 5 BASIC10.31□□□□□ -0.76
CFTRP13569 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC10.31□□□□□ -0.76
CFTRP13569 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CFTRP13569 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CFTRP13569 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CFTRP13569 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CFTRP13569 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC10.3□□□□□ -0.76
CFTRP13569 GAPDHP24-201ENST00000328713 983 ntBASIC10.3□□□□□ -0.76
CFTRP13569 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CFTRP13569 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CFTRP13569 CUBNP2-201ENST00000443534 1139 ntBASIC10.3□□□□□ -0.76
CFTRP13569 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC10.3□□□□□ -0.76
CFTRP13569 IGKV1OR22-5-201ENST00000458718 354 ntBASIC10.3□□□□□ -0.76
CFTRP13569 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC10.3□□□□□ -0.76
CFTRP13569 HAUS8P1-201ENST00000549005 542 ntBASIC10.3□□□□□ -0.76
CFTRP13569 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC10.3□□□□□ -0.76
CFTRP13569 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC10.3□□□□□ -0.76
CFTRP13569 AC021766.1-201ENST00000624404 741 ntBASIC10.3□□□□□ -0.76
CFTRP13569 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CFTRP13569 YES1P1-201ENST00000418510 1628 ntBASIC10.3□□□□□ -0.76
CFTRP13569 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CFTRP13569 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.3□□□□□ -0.76
CFTRP13569 AP001541.1-201ENST00000623322 1904 ntBASIC10.3□□□□□ -0.76
CFTRP13569 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC10.3□□□□□ -0.76
CFTRP13569 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC10.3□□□□□ -0.76
CFTRP13569 AC011815.2-201ENST00000618230 2021 ntBASIC10.3□□□□□ -0.76
CFTRP13569 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC10.3□□□□□ -0.76
CFTRP13569 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CFTRP13569 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CFTRP13569 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CFTRP13569 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CFTRP13569 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC10.3□□□□□ -0.76
CFTRP13569 HMGB3P24-201ENST00000433260 622 ntBASIC10.3□□□□□ -0.76
CFTRP13569 CDH12P4-201ENST00000517835 295 ntBASIC10.3□□□□□ -0.76
CFTRP13569 CDH12P3-201ENST00000517935 295 ntBASIC10.3□□□□□ -0.76
CFTRP13569 CDH12P1-201ENST00000518435 295 ntBASIC10.3□□□□□ -0.76
CFTRP13569 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CFTRP13569 AC097467.4-201ENST00000605504 141 ntBASIC10.3□□□□□ -0.76
CFTRP13569 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC10.3□□□□□ -0.76
CFTRP13569 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
CFTRP13569 MIR8080-201ENST00000622224 89 ntBASIC10.3□□□□□ -0.76
CFTRP13569 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CFTRP13569 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CFTRP13569 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CFTRP13569 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CFTRP13569 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC10.29□□□□□ -0.76
CFTRP13569 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms