Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MIR6826-201ENST00000617808 98 ntBASIC6.54□□□□□ -1.36
RETP07949 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.54□□□□□ -1.36
RETP07949 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.54□□□□□ -1.36
RETP07949 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RETP07949 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.54□□□□□ -1.36
RETP07949 AC079776.5-201ENST00000641920 211 ntBASIC6.54□□□□□ -1.36
RETP07949 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RETP07949 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RETP07949 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RETP07949 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RETP07949 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RETP07949 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RETP07949 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RETP07949 AC110597.1-201ENST00000562669 3176 ntBASIC6.54□□□□□ -1.36
RETP07949 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RETP07949 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RETP07949 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RETP07949 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RETP07949 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RETP07949 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.54□□□□□ -1.36
RETP07949 AC020658.2-201ENST00000559030 4020 ntBASIC6.53□□□□□ -1.36
RETP07949 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RETP07949 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.53□□□□□ -1.36
RETP07949 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 AC013488.1-201ENST00000526618 1838 ntBASIC6.53□□□□□ -1.36
RETP07949 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
RETP07949 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.53□□□□□ -1.36
RETP07949 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
RETP07949 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.53□□□□□ -1.36
RETP07949 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.53□□□□□ -1.36
RETP07949 MYO5BP2-201ENST00000449815 1277 ntBASIC6.53□□□□□ -1.36
RETP07949 AC023194.2-201ENST00000465398 406 ntBASIC6.53□□□□□ -1.36
RETP07949 PPP1R11P1-201ENST00000486095 376 ntBASIC6.53□□□□□ -1.36
RETP07949 FTH1P8-201ENST00000498161 514 ntBASIC6.53□□□□□ -1.36
RETP07949 PSMA2P2-201ENST00000504319 686 ntBASIC6.53□□□□□ -1.36
RETP07949 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
RETP07949 LDHAP1-201ENST00000509421 992 ntBASIC6.53□□□□□ -1.36
RETP07949 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.53□□□□□ -1.36
RETP07949 AC006499.4-201ENST00000510947 694 ntBASIC6.53□□□□□ -1.36
RETP07949 OR4A13P-201ENST00000529316 942 ntBASIC6.53□□□□□ -1.36
RETP07949 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.53□□□□□ -1.36
RETP07949 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.53□□□□□ -1.36
RETP07949 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.53□□□□□ -1.36
RETP07949 NPIPB1P-202ENST00000588786 828 ntBASIC6.53□□□□□ -1.36
RETP07949 AC008536.1-201ENST00000602872 669 ntBASIC6.53□□□□□ -1.36
RETP07949 U1.41-201ENST00000617626 165 ntBASIC6.53□□□□□ -1.36
RETP07949 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.53□□□□□ -1.36
RETP07949 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.53□□□□□ -1.36
RETP07949 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.53□□□□□ -1.36
RETP07949 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.53□□□□□ -1.36
RETP07949 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RETP07949 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RETP07949 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.52□□□□□ -1.36
RETP07949 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
RETP07949 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RETP07949 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.52□□□□□ -1.37
RETP07949 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RETP07949 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RETP07949 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RETP07949 SNORA70.3-201ENST00000365075 132 ntBASIC6.52□□□□□ -1.37
RETP07949 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.52□□□□□ -1.37
RETP07949 RNA5SP284-201ENST00000384547 118 ntBASIC6.52□□□□□ -1.37
RETP07949 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.52□□□□□ -1.37
RETP07949 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.52□□□□□ -1.37
RETP07949 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.52□□□□□ -1.37
RETP07949 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.52□□□□□ -1.37
RETP07949 MTND6P12-201ENST00000428247 522 ntBASIC6.52□□□□□ -1.37
RETP07949 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RETP07949 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.52□□□□□ -1.37
RETP07949 HLA-DPA3-207ENST00000454398 229 ntBASIC6.52□□□□□ -1.37
RETP07949 AC026348.1-201ENST00000462549 1053 ntBASIC6.52□□□□□ -1.37
RETP07949 RPL12P30-201ENST00000488389 499 ntBASIC6.52□□□□□ -1.37
RETP07949 SNX18P24-201ENST00000505249 671 ntBASIC6.52□□□□□ -1.37
RETP07949 AC008638.1-201ENST00000506035 866 ntBASIC6.52□□□□□ -1.37
RETP07949 AC021220.1-201ENST00000507445 630 ntBASIC6.52□□□□□ -1.37
RETP07949 RPL7L1P4-201ENST00000513004 707 ntBASIC6.52□□□□□ -1.37
RETP07949 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.52□□□□□ -1.37
RETP07949 SNORD46.2-201ENST00000516021 102 ntBASIC6.52□□□□□ -1.37
RETP07949 RNA5SP271-201ENST00000516700 88 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms