Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PDGFAP04085 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.41□□□□□ -1.22
PDGFAP04085 AC099654.15-201ENST00000639802 509 ntBASIC7.41□□□□□ -1.22
PDGFAP04085 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDGFAP04085 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC7.41□□□□□ -1.22
PDGFAP04085 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PDGFAP04085 PWRN1-212ENST00000569908 1435 ntBASIC7.41□□□□□ -1.22
PDGFAP04085 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.41□□□□□ -1.22
PDGFAP04085 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDGFAP04085 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
PDGFAP04085 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDGFAP04085 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.41□□□□□ -1.22
PDGFAP04085 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDGFAP04085 CASR-201ENST00000490131 4015 ntTSL 5 BASIC7.41□□□□□ -1.22
PDGFAP04085 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
PDGFAP04085 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDGFAP04085 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PDGFAP04085 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PDGFAP04085 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.41□□□□□ -1.22
PDGFAP04085 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.4□□□□□ -1.22
PDGFAP04085 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
PDGFAP04085 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 AL121657.1-201ENST00000327215 531 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 Y_RNA.248-201ENST00000364501 109 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 RNA5SP442-201ENST00000365050 107 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 RNY3P14-201ENST00000384309 102 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
PDGFAP04085 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 HSPD1P16-201ENST00000402302 394 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 RN7SKP33-201ENST00000410942 340 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 OR10U1P-201ENST00000414690 905 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 MRPS36P1-201ENST00000421291 307 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC000362.1-201ENST00000433725 425 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC093716.1-201ENST00000435923 377 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 HMGB1P16-201ENST00000447155 540 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 ST13P20-201ENST00000447996 1065 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC027673.1-201ENST00000456245 405 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 RN7SL228P-201ENST00000470060 303 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC072039.1-201ENST00000477611 581 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 OR11I1P-201ENST00000486033 954 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 CDH12P2-201ENST00000504393 298 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC112203.1-201ENST00000506315 1020 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 RNA5SP75-201ENST00000516841 111 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.4□□□□□ -1.22
PDGFAP04085 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.4□□□□□ -1.22
PDGFAP04085 OR4A11P-201ENST00000529557 906 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC005832.3-201ENST00000537929 631 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 MIR548S-201ENST00000581352 82 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.4□□□□□ -1.22
PDGFAP04085 AP002884.5-201ENST00000595053 1132 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC009237.13-201ENST00000603193 276 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC083899.3-201ENST00000603413 594 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC009237.12-201ENST00000604755 742 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC090186.1-201ENST00000605991 572 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AP005137.2-201ENST00000609238 400 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC239600.2-201ENST00000619615 1165 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AL356266.1-201ENST00000623311 483 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 AC091953.4-201ENST00000625179 341 ntBASIC7.4□□□□□ -1.22
PDGFAP04085 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
PDGFAP04085 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.4□□□□□ -1.22
PDGFAP04085 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.4□□□□□ -1.22
PDGFAP04085 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PDGFAP04085 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
PDGFAP04085 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
PDGFAP04085 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.23
PDGFAP04085 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms