Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
HOXA2O43364 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
HOXA2O43364 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 AL512504.2-201ENST00000445455 1909 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 AC027279.1-201ENST00000568885 4284 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 OR8B9P-202ENST00000642028 5216 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
HOXA2O43364 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
HOXA2O43364 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 RNA5SP463-201ENST00000363030 120 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
HOXA2O43364 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 METTL5-204ENST00000409340 472 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.64□□□□□ -1.03
HOXA2O43364 RN7SKP139-201ENST00000410411 293 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 ARMC4P1-201ENST00000438905 707 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 AC005099.1-201ENST00000442083 610 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 AC023512.1-201ENST00000444513 499 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.64□□□□□ -1.03
HOXA2O43364 AL929410.2-201ENST00000451170 189 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC8.64□□□□□ -1.03
HOXA2O43364 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.64□□□□□ -1.03
HOXA2O43364 MTCO1P35-201ENST00000515270 228 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 RNU6-358P-201ENST00000516564 75 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 GTF2IP22-201ENST00000554443 182 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.64□□□□□ -1.03
HOXA2O43364 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 PRR13P4-201ENST00000577786 421 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 MIR548AB-201ENST00000584917 84 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 RPL23AP77-201ENST00000588044 463 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 AL162730.1-201ENST00000605734 292 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 AC008536.2-201ENST00000607284 349 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC8.64□□□□□ -1.03
HOXA2O43364 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 AC025287.2-201ENST00000621911 668 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 AC019278.1-201ENST00000623516 479 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
HOXA2O43364 AC124864.2-201ENST00000624736 186 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 SMG1P1-202ENST00000309865 4223 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 MTCO1P23-201ENST00000415223 1526 ntBASIC8.64□□□□□ -1.03
HOXA2O43364 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXA2O43364 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.64□□□□□ -1.03
HOXA2O43364 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
HOXA2O43364 ENO1P4-201ENST00000416471 1785 ntBASIC8.63□□□□□ -1.03
HOXA2O43364 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
HOXA2O43364 ZNF812P-201ENST00000457674 1694 ntBASIC8.63□□□□□ -1.03
HOXA2O43364 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.63□□□□□ -1.03
HOXA2O43364 THAP12P6-201ENST00000431978 2310 ntBASIC8.63□□□□□ -1.03
HOXA2O43364 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
HOXA2O43364 RNU6-621P-201ENST00000364752 109 ntBASIC8.63□□□□□ -1.03
HOXA2O43364 Y_RNA.302-201ENST00000364997 102 ntBASIC8.63□□□□□ -1.03
HOXA2O43364 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms