Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AL356361.1-201ENST00000400943 1459 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SKP128-201ENST00000364270 303 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 RNU1-16P-201ENST00000365477 164 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC090559.2-201ENST00000366360 430 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 MIR433-201ENST00000384837 93 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AL391419.1-201ENST00000398901 1275 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SKP129-201ENST00000410288 299 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC017104.2-201ENST00000417000 321 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC015977.1-201ENST00000418887 292 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 HCG25-217ENST00000422366 702 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC010880.1-202ENST00000427950 432 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 SNX18P14-201ENST00000429308 574 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AL731534.1-201ENST00000434711 269 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC007000.1-201ENST00000453064 794 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AL663058.1-201ENST00000453379 353 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 VPS25P1-201ENST00000455691 508 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 TRBV5-2-201ENST00000489095 273 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 snoU109.5-201ENST00000516231 132 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 POLB-211ENST00000521492 786 ntTSL 2 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC009120.3-201ENST00000563335 499 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 MIR4470-201ENST00000583453 72 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC107990.1-201ENST00000590415 489 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AL354740.1-202ENST00000612837 290 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC023310.4-201ENST00000613130 650 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC073575.2-201ENST00000614212 627 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC012629.4-201ENST00000623327 259 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC091059.2-201ENST00000623355 614 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AP000356.4-201ENST00000639500 172 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC000374.1-201ENST00000434698 1745 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 HSPD1P9-201ENST00000420325 1636 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AL034549.2-201ENST00000618285 3373 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AL731532.2-201ENST00000623542 1953 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 AC099654.3-201ENST00000447087 1546 ntBASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHKB-CPT1BH3BT56 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC092692.1-201ENST00000623625 2595 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 MTCO1P22-201ENST00000604619 1360 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 THAP12P8-201ENST00000447914 2115 ntBASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.28□□□□□ -1.88
CHKB-CPT1BH3BT56 AC126323.6-202ENST00000568092 3511 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms