Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC133552.4-201ENST00000576103 676 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC233702.7-202ENST00000582941 211 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC245128.3-201ENST00000594721 748 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC005229.3-201ENST00000603438 323 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC022387.2-201ENST00000604050 448 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRRM4A7MD48 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 BIN2P1-201ENST00000504996 1530 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SRRM4A7MD48 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRRM4A7MD48 DDX18P6-201ENST00000450119 1997 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRRM4A7MD48 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SRRM4A7MD48 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SRRM4A7MD48 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC011369.2-201ENST00000624423 1567 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SRRM4A7MD48 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SRRM4A7MD48 AC119674.1-213ENST00000641177 1386 ntBASIC5.16□□□□□ -1.58
SRRM4A7MD48 AP003486.1-201ENST00000525716 3994 ntBASIC5.15□□□□□ -1.58
SRRM4A7MD48 AC119674.1-202ENST00000641333 1860 ntBASIC5.15□□□□□ -1.58
SRRM4A7MD48 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.15□□□□□ -1.58
SRRM4A7MD48 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SRRM4A7MD48 AC005702.3-201ENST00000585345 1447 ntBASIC5.15□□□□□ -1.58
SRRM4A7MD48 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SRRM4A7MD48 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SRRM4A7MD48 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SRRM4A7MD48 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
SRRM4A7MD48 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SRRM4A7MD48 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SRRM4A7MD48 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.15□□□□□ -1.58
SRRM4A7MD48 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.15□□□□□ -1.58
SRRM4A7MD48 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC010894.1-201ENST00000313760 361 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 RNA5SP478-201ENST00000364657 115 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC245036.1-201ENST00000391727 309 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 RN7SKP281-201ENST00000410472 352 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 RPL23AP18-201ENST00000416139 468 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 CYP4F30P-202ENST00000420048 405 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AP003385.1-201ENST00000426387 893 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC083862.1-201ENST00000427378 1242 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC092967.1-201ENST00000449016 481 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AL356390.1-201ENST00000455684 397 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC008126.1-201ENST00000549019 480 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC004232.2-201ENST00000574245 821 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 RN7SL475P-201ENST00000583379 298 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 RPL7AP69-201ENST00000595306 806 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC024589.2-201ENST00000605642 1294 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AL008723.3-201ENST00000608926 449 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 AL137246.2-201ENST00000613439 662 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 AC007204.1-201ENST00000621794 555 ntBASIC5.15□□□□□ -1.59
SRRM4A7MD48 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SRRM4A7MD48 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms