Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC016724.1-201ENST00000453215 421 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 RNA5SP418-201ENST00000515951 117 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 MTND5P21-201ENST00000531961 522 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC023968.1-201ENST00000560719 475 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 DYNLL1P1-201ENST00000595442 269 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC131009.3-201ENST00000621809 287 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 RPL31P11-201ENST00000426558 1558 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC015871.3-201ENST00000618835 2261 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AKAP17BP-201ENST00000431706 2719 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AL354692.1-201ENST00000423044 315 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC073508.1-201ENST00000428866 656 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 Z83838.1-202ENST00000456225 839 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 RN7SL254P-201ENST00000460609 284 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 GM2AP2-201ENST00000491764 562 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 RPL5P14-201ENST00000494197 878 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 SCARNA1-201ENST00000517138 166 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 MRPS21P9-201ENST00000571150 257 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC006116.7-201ENST00000590141 756 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AC025262.3-201ENST00000623666 360 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.4□□□□□ -1.22
VTA1Q9NP79 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
VTA1Q9NP79 AP005139.1-201ENST00000580702 1647 ntBASIC7.4□□□□□ -1.22
VTA1Q9NP79 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.4□□□□□ -1.23
VTA1Q9NP79 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VTA1Q9NP79 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.4□□□□□ -1.23
VTA1Q9NP79 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
VTA1Q9NP79 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.4□□□□□ -1.23
VTA1Q9NP79 AL117339.4-201ENST00000608335 7063 ntBASIC7.4□□□□□ -1.23
VTA1Q9NP79 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VTA1Q9NP79 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 ASNSP6-201ENST00000592770 1618 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 CASC19-246ENST00000641625 1606 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 QRSL1P1-201ENST00000400977 1540 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 CASC19-255ENST00000641733 1385 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 RNU6-609P-201ENST00000365459 107 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms