Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF648-201ENST00000339948 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC093426.1-201ENST00000561926 3011 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 PAPD4-201ENST00000296783 3129 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 LIPG-202ENST00000427224 1760 ntTSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 CYP4A22-207ENST00000620131 1760 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 CTAGE4-201ENST00000486333 2588 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 CTAGE8-201ENST00000487179 2588 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF566-209ENST00000493391 3425 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 PITRM1-202ENST00000380989 3487 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF581-201ENST00000270451 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RNU6-309P-201ENST00000364573 106 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RNU6-590P-201ENST00000365039 107 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 MIR219A2-202ENST00000385220 97 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RPL21P17-201ENST00000397467 475 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RNU6-383P-201ENST00000410864 94 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 HINT2P1-201ENST00000419438 481 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 SAGE2P-201ENST00000420011 2126 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RPL17P36-201ENST00000420302 549 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 NDUFA3P3-201ENST00000423475 250 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RAB15-202ENST00000426039 683 ntTSL 3 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RPL12P46-201ENST00000436610 195 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 ULBP3-202ENST00000438272 735 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 GRPEL2P3-201ENST00000448626 640 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RN7SL22P-201ENST00000471800 269 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC026470.1-201ENST00000478038 846 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AF186996.7-201ENST00000492781 209 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC020593.1-201ENST00000507399 299 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC022296.1-201ENST00000512176 682 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC103783.1-201ENST00000520506 373 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AP001284.1-201ENST00000528393 2118 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC018448.1-201ENST00000552843 316 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 MIR1273C-201ENST00000578669 77 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 SNORD55-201ENST00000581525 80 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF581-204ENST00000588537 1100 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AD000091.1-201ENST00000592379 287 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 KXD1-210ENST00000599000 498 ntTSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AL157791.2-201ENST00000604758 478 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AL359747.1-202ENST00000606028 918 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AL360181.4-201ENST00000621752 134 ntBASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 FURIN-208ENST00000640725 224 ntTSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 MAGED2-202ENST00000347546 2177 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 BCAR3-202ENST00000370243 3200 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 ZSCAN5A-205ENST00000587340 2450 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 NRF1-205ENST00000393232 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 CA13-201ENST00000321764 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
KRTAP3-3Q9BYR6 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms