Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC131935.1-201ENST00000524621 333 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AP000916.1-201ENST00000533869 835 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AL512310.9-201ENST00000553311 948 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 IGLJCOR18-201ENST00000584002 424 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AL031985.2-201ENST00000600955 480 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AL031775.1-201ENST00000607014 887 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AL161420.1-201ENST00000619393 264 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AC005832.2-201ENST00000538921 1430 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 AL356361.1-201ENST00000400943 1459 ntBASIC8.96□□□□□ -0.98
CCDC85AQ96PX6 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC087392.3-202ENST00000358446 1754 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 PPIAP22-201ENST00000358455 498 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 RNU4-75P-201ENST00000364621 146 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 CXADRP1-201ENST00000398098 1095 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 MTND4LP20-201ENST00000402379 270 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 MTND4P3-201ENST00000417829 541 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC073900.1-201ENST00000429766 776 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 YRDCP3-201ENST00000456507 480 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 GAPDHP53-201ENST00000458397 924 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 RN7SL180P-201ENST00000466769 294 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC104689.1-201ENST00000473356 768 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 RN7SL790P-201ENST00000474043 298 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC131233.1-201ENST00000479200 955 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 RPS7P11-201ENST00000484240 586 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AL591122.1-201ENST00000487348 492 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC080014.1-201ENST00000496877 1201 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 HMGB1P3-201ENST00000502802 616 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC138938.1-201ENST00000515431 782 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 RN7SKP233-201ENST00000517005 110 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC113191.1-201ENST00000517759 403 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC069240.2-201ENST00000550242 609 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 UBE2CP1-201ENST00000557130 554 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC090695.1-201ENST00000561269 1222 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC068135.2-201ENST00000569293 1028 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC015801.1-201ENST00000585651 153 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AP000811.1-201ENST00000603803 651 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC068944.2-201ENST00000610373 403 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC091544.5-201ENST00000620192 3815 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC015804.1-201ENST00000622935 435 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 AC087894.3-201ENST00000623682 349 ntBASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
CCDC85AQ96PX6 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CCDC85AQ96PX6 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CCDC85AQ96PX6 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CCDC85AQ96PX6 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms