Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 KYNUP1-201ENST00000466683 1406 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM47Q96LD4 TATDN2P1-201ENST00000443767 2331 ntBASIC8.85□□□□□ -0.99
TRIM47Q96LD4 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 RNA5SP260-201ENST00000363849 111 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AL139039.2-201ENST00000407436 479 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 SNORA11.3-201ENST00000408471 128 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 MIR1277-201ENST00000408536 78 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AL593851.1-201ENST00000426171 157 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 USP9YP9-201ENST00000429406 715 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AL365220.1-201ENST00000432923 399 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AL606490.8-201ENST00000441624 319 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 EEF1E1P1-201ENST00000446998 430 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 OR9M1P-201ENST00000459641 921 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 RN7SL55P-201ENST00000464534 297 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC025271.1-201ENST00000485045 429 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 RPL10P7-201ENST00000495649 625 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 RN7SL649P-201ENST00000496974 275 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AK4P6-201ENST00000505168 528 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 CR383658.1-201ENST00000514609 734 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC126323.4-201ENST00000566935 234 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC012182.1-201ENST00000570133 895 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 RN7SL473P-201ENST00000580341 299 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC005730.3-201ENST00000583067 366 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC007923.2-201ENST00000584218 1591 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC009237.13-201ENST00000603193 276 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC119501.1-201ENST00000603646 475 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 SNORA11.6-201ENST00000619030 128 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC093875.1-201ENST00000623688 504 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AL121835.2-201ENST00000624253 3502 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 XRCC6P2-201ENST00000457831 1822 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 MTND4P12-201ENST00000498999 1377 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.84□□□□□ -0.99
TRIM47Q96LD4 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM47Q96LD4 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -1
TRIM47Q96LD4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
TRIM47Q96LD4 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.83□□□□□ -1
TRIM47Q96LD4 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 DDX6P1-205ENST00000441966 1436 ntBASIC8.83□□□□□ -1
TRIM47Q96LD4 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM47Q96LD4 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
TRIM47Q96LD4 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms