Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MTND5P8-201ENST00000449817 1083 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 PPIAP32-201ENST00000449940 472 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 OR52I1-201ENST00000450052 1050 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AL353718.1-201ENST00000451028 517 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.21□□□□□ -1.26
HPS3Q969F9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.21□□□□□ -1.26
HPS3Q969F9 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC073581.1-201ENST00000519036 575 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC131935.1-201ENST00000524621 333 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.21□□□□□ -1.26
HPS3Q969F9 CR383656.14-201ENST00000551951 406 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 CHEK2P2-201ENST00000554701 672 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC098483.2-201ENST00000603158 454 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AC105148.1-201ENST00000604961 409 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.21□□□□□ -1.26
HPS3Q969F9 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
HPS3Q969F9 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 AC067942.1-201ENST00000488045 1493 ntBASIC7.21□□□□□ -1.26
HPS3Q969F9 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
HPS3Q969F9 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.21□□□□□ -1.26
HPS3Q969F9 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.21□□□□□ -1.26
HPS3Q969F9 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HPS3Q969F9 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.2□□□□□ -1.26
HPS3Q969F9 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HPS3Q969F9 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.2□□□□□ -1.26
HPS3Q969F9 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
HPS3Q969F9 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.2□□□□□ -1.26
HPS3Q969F9 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 AL391261.1-201ENST00000555712 1479 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC010894.1-201ENST00000313760 361 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.2□□□□□ -1.26
HPS3Q969F9 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC7.2□□□□□ -1.26
HPS3Q969F9 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.2□□□□□ -1.26
HPS3Q969F9 RPL9P15-201ENST00000491096 532 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 AC022206.1-201ENST00000495947 347 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.2□□□□□ -1.26
HPS3Q969F9 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.2□□□□□ -1.26
HPS3Q969F9 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.2□□□□□ -1.26
HPS3Q969F9 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.2□□□□□ -1.26
HPS3Q969F9 HMGN1P26-201ENST00000558737 303 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC010547.7-201ENST00000570323 333 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HPS3Q969F9 RN7SL475P-201ENST00000583379 298 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 AL391001.1-201ENST00000602747 715 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.2□□□□□ -1.26
HPS3Q969F9 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 AL158211.2-201ENST00000607282 395 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 U91328.4-201ENST00000608919 517 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 AP000240.1-201ENST00000609910 452 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.2□□□□□ -1.26
HPS3Q969F9 AL138693.1-201ENST00000622219 129 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 FO681491.1-202ENST00000623392 737 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 AC022034.1-201ENST00000512867 2156 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.2□□□□□ -1.26
HPS3Q969F9 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.2□□□□□ -1.26
HPS3Q969F9 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.2□□□□□ -1.26
HPS3Q969F9 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HPS3Q969F9 PARP4P1-201ENST00000435945 2337 ntBASIC7.19□□□□□ -1.26
HPS3Q969F9 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HPS3Q969F9 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms