Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 CYB5AP4-201ENST00000396692 399 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 CYP4F30P-202ENST00000420048 405 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 EIF1P7-201ENST00000487533 337 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 FAM27E4-201ENST00000605259 342 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 NRIR-201ENST00000366140 799 ntTSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RN7SKP125-201ENST00000410481 302 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 RN7SKP166-201ENST00000410812 305 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AP000534.2-201ENST00000412729 568 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 AC073342.3-201ENST00000624211 193 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 OR7A1P-202ENST00000641542 1158 ntBASIC4.13□□□□□ -1.75
ALMS1Q8TCU4 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC127024.8-201ENST00000623719 2094 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 VN1R54P-201ENST00000435210 1049 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 RN7SL326P-201ENST00000477493 296 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AL049840.6-201ENST00000604583 345 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC027348.2-201ENST00000624375 642 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 NEK2P4-201ENST00000425793 1329 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AL512310.3-201ENST00000547023 1335 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 RNU105B-201ENST00000364478 208 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC008753.1-201ENST00000423096 284 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC021146.10-201ENST00000515628 706 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 SNORA43.3-201ENST00000517240 103 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC139493.1-201ENST00000604368 397 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 RNU1-46P-201ENST00000384425 164 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 OR7E101P-201ENST00000400428 513 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 RPL36AP39-201ENST00000445859 318 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 RPS17P15-201ENST00000475609 349 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 AC073916.1-201ENST00000545095 130 ntBASIC4.12□□□□□ -1.75
ALMS1Q8TCU4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms