Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RHBDL3P58872 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RHBDL3P58872 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 SETP9-201ENST00000423837 832 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 RPS7P14-201ENST00000426405 583 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 DNAJA1P5-201ENST00000440278 943 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.63□□□□□ -1.19
RHBDL3P58872 CEACAMP5-201ENST00000448037 961 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.63□□□□□ -1.19
RHBDL3P58872 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 AL133351.3-201ENST00000454998 193 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.63□□□□□ -1.19
RHBDL3P58872 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.63□□□□□ -1.19
RHBDL3P58872 SNX18P24-201ENST00000505249 671 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC7.63□□□□□ -1.19
RHBDL3P58872 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.63□□□□□ -1.19
RHBDL3P58872 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.63□□□□□ -1.19
RHBDL3P58872 AC090115.2-201ENST00000548060 883 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 AC090826.1-203ENST00000569235 490 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AP005136.2-201ENST00000583253 1049 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 AL953862.2-201ENST00000603089 820 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 AP001437.1-201ENST00000608783 456 ntBASIC7.63□□□□□ -1.19
RHBDL3P58872 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.63□□□□□ -1.19
RHBDL3P58872 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.63□□□□□ -1.19
RHBDL3P58872 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RHBDL3P58872 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
RHBDL3P58872 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.63□□□□□ -1.19
RHBDL3P58872 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RHBDL3P58872 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.63□□□□□ -1.19
RHBDL3P58872 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RHBDL3P58872 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.62□□□□□ -1.19
RHBDL3P58872 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.62□□□□□ -1.19
RHBDL3P58872 AC125238.2-201ENST00000430003 1440 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RHBDL3P58872 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RHBDL3P58872 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.62□□□□□ -1.19
RHBDL3P58872 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 AL023284.3-201ENST00000407767 334 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 AJ239321.1-201ENST00000424255 564 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 Z85994.2-201ENST00000434327 452 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 AL645936.1-201ENST00000441979 518 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 MTND6P5-201ENST00000448266 512 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
RHBDL3P58872 ATG10-AS1-201ENST00000504846 648 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.62□□□□□ -1.19
RHBDL3P58872 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.62□□□□□ -1.19
RHBDL3P58872 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 AC009268.1-201ENST00000561352 1203 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 AC015818.6-201ENST00000584274 634 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.62□□□□□ -1.19
RHBDL3P58872 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.62□□□□□ -1.19
RHBDL3P58872 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.62□□□□□ -1.19
RHBDL3P58872 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.62□□□□□ -1.19
RHBDL3P58872 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
RHBDL3P58872 CDY5P-201ENST00000411487 1580 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 CDY9P-201ENST00000451397 1580 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 ZNF402P-201ENST00000404435 3100 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
RHBDL3P58872 AC018717.1-201ENST00000457712 1505 ntBASIC7.62□□□□□ -1.19
RHBDL3P58872 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RHBDL3P58872 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
RHBDL3P58872 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RHBDL3P58872 AC127070.3-201ENST00000503695 3263 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 AC010624.4-201ENST00000597606 1351 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
RHBDL3P58872 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.61□□□□□ -1.19
RHBDL3P58872 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.61□□□□□ -1.19
RHBDL3P58872 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.61□□□□□ -1.19
RHBDL3P58872 AL133243.2-201ENST00000610331 1621 ntBASIC7.61□□□□□ -1.19
RHBDL3P58872 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.61□□□□□ -1.19
RHBDL3P58872 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
RHBDL3P58872 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RHBDL3P58872 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.61□□□□□ -1.19
RHBDL3P58872 MAPRE1P3-201ENST00000435438 796 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms