Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF2A1P52655 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
GTF2A1P52655 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC011755.1-201ENST00000623763 2049 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 SNORA35-201ENST00000386104 128 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 RN7SKP286-201ENST00000410894 299 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 HYALP1-201ENST00000417674 1279 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2A1P52655 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC083806.1-201ENST00000468934 316 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC005017.1-201ENST00000482002 490 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 RN7SL239P-201ENST00000490061 300 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 RPL34P29-201ENST00000491411 325 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 RN7SL608P-201ENST00000492377 279 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC079866.1-201ENST00000534985 1220 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF2A1P52655 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC133569.1-201ENST00000564327 373 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 ZNF322P1-201ENST00000568013 1209 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.05□□□□□ -1.44
GTF2A1P52655 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 MIR6834-201ENST00000622807 81 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF2A1P52655 FRG1EP-201ENST00000634469 770 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 AC099654.6-201ENST00000636487 512 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
GTF2A1P52655 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2A1P52655 Z97989.1-201ENST00000531702 2421 ntBASIC6.05□□□□□ -1.44
GTF2A1P52655 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GTF2A1P52655 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF2A1P52655 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
GTF2A1P52655 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF2A1P52655 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF2A1P52655 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 AP001642.1-201ENST00000624727 2117 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 MIR152-201ENST00000385212 87 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AL035467.1-201ENST00000403583 686 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 RN7SKP148-201ENST00000410179 275 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AC010878.1-201ENST00000456500 1047 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.04□□□□□ -1.44
GTF2A1P52655 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AP000942.1-201ENST00000463969 747 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 NPM1P29-201ENST00000483112 803 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
GTF2A1P52655 HNRNPA1P17-201ENST00000496620 924 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2A1P52655 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.04□□□□□ -1.44
GTF2A1P52655 NXPE2P1-201ENST00000543705 726 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF2A1P52655 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.04□□□□□ -1.44
GTF2A1P52655 AL121579.2-201ENST00000555466 590 ntBASIC6.04□□□□□ -1.44
GTF2A1P52655 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms