Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SLC6A4P31645 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SLC6A4P31645 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SLC6A4P31645 MAPK10-365ENST00000641902 3825 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AC023245.2-201ENST00000530760 2978 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 RNU6-618P-201ENST00000363518 112 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 CCNB2P1-201ENST00000399411 1150 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 MTATP6P31-201ENST00000406985 692 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AL139184.1-202ENST00000422303 222 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AC083862.1-201ENST00000427378 1242 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.76□□□□□ -1.33
SLC6A4P31645 MTATP6P17-201ENST00000431030 672 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.76□□□□□ -1.33
SLC6A4P31645 RPL12P24-201ENST00000474907 486 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 RN7SL705P-201ENST00000481678 294 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC093763.2-201ENST00000505334 1223 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.76□□□□□ -1.33
SLC6A4P31645 RN7SKP70-201ENST00000516655 271 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AL133399.1-201ENST00000527476 298 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AL162632.2-201ENST00000553933 399 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC027216.1-201ENST00000577726 685 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 OR1AB1P-201ENST00000585564 761 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 BUB1P1-201ENST00000603541 607 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AC112503.2-201ENST00000609005 552 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 AL589743.6-201ENST00000611025 117 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 U1.41-201ENST00000617626 165 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 SNX18P10-201ENST00000625014 519 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.76□□□□□ -1.33
SLC6A4P31645 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.76□□□□□ -1.33
SLC6A4P31645 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.76□□□□□ -1.33
SLC6A4P31645 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
SLC6A4P31645 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SLC6A4P31645 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.76□□□□□ -1.33
SLC6A4P31645 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.76□□□□□ -1.33
SLC6A4P31645 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SLC6A4P31645 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SLC6A4P31645 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SLC6A4P31645 AL139384.2-201ENST00000613809 3590 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SLC6A4P31645 AC104162.1-201ENST00000430831 2382 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.75□□□□□ -1.33
SLC6A4P31645 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SLC6A4P31645 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.75□□□□□ -1.33
SLC6A4P31645 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.75□□□□□ -1.33
SLC6A4P31645 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SLC6A4P31645 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SLC6A4P31645 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SLC6A4P31645 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.75□□□□□ -1.33
SLC6A4P31645 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SLC6A4P31645 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
SLC6A4P31645 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SLC6A4P31645 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.75□□□□□ -1.33
SLC6A4P31645 RN7SKP171-201ENST00000364417 303 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 RNU6-609P-201ENST00000365459 107 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.75□□□□□ -1.33
SLC6A4P31645 GPN3P1-201ENST00000423883 535 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SLC6A4P31645 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.75□□□□□ -1.33
SLC6A4P31645 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.75□□□□□ -1.33
SLC6A4P31645 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.75□□□□□ -1.33
SLC6A4P31645 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SLC6A4P31645 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.75□□□□□ -1.33
SLC6A4P31645 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.75□□□□□ -1.33
SLC6A4P31645 AC106822.1-201ENST00000502647 526 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 AC093816.1-201ENST00000515076 913 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 IGHV3-57-201ENST00000520143 280 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 AC113192.3-201ENST00000529152 742 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 OR52K3P-201ENST00000531655 943 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 AC068339.2-201ENST00000534395 618 ntBASIC6.75□□□□□ -1.33
SLC6A4P31645 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.75□□□□□ -1.33
SLC6A4P31645 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms