Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC12P31275 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 TREML3P-201ENST00000457327 501 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 NDUFB4P1-201ENST00000462398 381 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC008565.1-201ENST00000509046 885 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC095059.2-201ENST00000510601 933 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 MTCYBP19-201ENST00000517463 1124 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.7□□□□□ -1.34
HOXC12P31275 DEFB130C-202ENST00000530001 230 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC092865.1-201ENST00000544395 1023 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC009729.1-201ENST00000548873 1133 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC090888.1-201ENST00000561335 1141 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 DNM1P31-201ENST00000564149 696 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC12P31275 STX8-209ENST00000574431 731 ntTSL 3 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC134669.1-201ENST00000581275 672 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC024589.2-201ENST00000605642 1294 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AL096855.2-201ENST00000605785 369 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.7□□□□□ -1.34
HOXC12P31275 AP000255.1-201ENST00000610276 676 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC023310.4-201ENST00000613130 650 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 FAM27E3-202ENST00000614611 340 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC073569.3-201ENST00000619055 682 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC241377.1-201ENST00000619797 406 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC007490.1-201ENST00000624321 703 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC12P31275 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC12P31275 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 MTCO1P28-201ENST00000574177 1528 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 AL022163.1-201ENST00000430261 1569 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 XRCC6P5-201ENST00000435236 1795 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 MAPK10-290ENST00000641237 2826 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HOXC12P31275 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HOXC12P31275 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 RN7SKP149-201ENST00000363008 344 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 RNU1-16P-201ENST00000365477 164 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HOXC12P31275 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 RNU6-83P-201ENST00000384568 112 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 MIR142-201ENST00000384835 87 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AC010385.1-201ENST00000412374 256 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 BTF3L4P1-201ENST00000413813 468 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 C1DP1-201ENST00000426049 402 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 MOB1AP1-201ENST00000430903 535 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AC013403.1-201ENST00000436954 263 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.69□□□□□ -1.34
HOXC12P31275 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.69□□□□□ -1.34
HOXC12P31275 MTND2P4-201ENST00000445034 1004 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.69□□□□□ -1.34
HOXC12P31275 OR52E7P-201ENST00000452394 933 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.69□□□□□ -1.34
HOXC12P31275 MRPS21P1-201ENST00000453850 223 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HOXC12P31275 NECAP1P2-201ENST00000455668 727 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 MTND4LP3-201ENST00000468320 276 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 RN7SL36P-201ENST00000469345 276 ntBASIC6.69□□□□□ -1.34
HOXC12P31275 AC069528.1-202ENST00000482888 637 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms