Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 AC094019.1-201ENST00000434678 472 ntBASIC4.99□□□□□ -1.61
CD28P10747 DNAJA1P5-201ENST00000440278 943 ntBASIC4.99□□□□□ -1.61
CD28P10747 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 AC009963.3-201ENST00000458090 486 ntBASIC4.99□□□□□ -1.61
CD28P10747 AC094085.1-201ENST00000468914 584 ntBASIC4.99□□□□□ -1.61
CD28P10747 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.99□□□□□ -1.61
CD28P10747 TRIM51DP-201ENST00000529746 596 ntBASIC4.99□□□□□ -1.61
CD28P10747 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.99□□□□□ -1.61
CD28P10747 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 MRPS21P8-201ENST00000569196 235 ntBASIC4.99□□□□□ -1.61
CD28P10747 AC015818.6-201ENST00000584274 634 ntBASIC4.99□□□□□ -1.61
CD28P10747 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.99□□□□□ -1.61
CD28P10747 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 AC025171.4-201ENST00000607250 1047 ntBASIC4.99□□□□□ -1.61
CD28P10747 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.99□□□□□ -1.61
CD28P10747 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 OR7E91P-202ENST00000642062 1198 ntBASIC4.99□□□□□ -1.61
CD28P10747 FO082842.1-201ENST00000423552 1370 ntBASIC4.99□□□□□ -1.61
CD28P10747 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CD28P10747 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC4.99□□□□□ -1.61
CD28P10747 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD28P10747 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CD28P10747 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CD28P10747 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 BRD7P1-201ENST00000557705 1915 ntBASIC4.98□□□□□ -1.61
CD28P10747 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 COX6B1P3-201ENST00000312310 260 ntBASIC4.98□□□□□ -1.61
CD28P10747 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CD28P10747 SNORD16-201ENST00000362803 99 ntBASIC4.98□□□□□ -1.61
CD28P10747 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CD28P10747 MIR323B-201ENST00000385269 82 ntBASIC4.98□□□□□ -1.61
CD28P10747 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC4.98□□□□□ -1.61
CD28P10747 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.98□□□□□ -1.61
CD28P10747 AC112492.2-201ENST00000432774 1030 ntBASIC4.98□□□□□ -1.61
CD28P10747 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 UGT2A3P7-201ENST00000510485 734 ntBASIC4.98□□□□□ -1.61
CD28P10747 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.98□□□□□ -1.61
CD28P10747 RN7SKP35-201ENST00000517210 151 ntBASIC4.98□□□□□ -1.61
CD28P10747 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.98□□□□□ -1.61
CD28P10747 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.98□□□□□ -1.61
CD28P10747 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.98□□□□□ -1.61
CD28P10747 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC4.98□□□□□ -1.61
CD28P10747 AC090826.1-203ENST00000569235 490 ntBASIC4.98□□□□□ -1.61
CD28P10747 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.98□□□□□ -1.61
CD28P10747 AL513218.1-201ENST00000606527 391 ntBASIC4.98□□□□□ -1.61
CD28P10747 AC092681.3-201ENST00000609463 678 ntBASIC4.98□□□□□ -1.61
CD28P10747 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.98□□□□□ -1.61
CD28P10747 AC005393.1-201ENST00000617916 584 ntBASIC4.98□□□□□ -1.61
CD28P10747 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CD28P10747 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 Z93929.1-201ENST00000418200 1475 ntBASIC4.98□□□□□ -1.61
CD28P10747 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
CD28P10747 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.98□□□□□ -1.61
CD28P10747 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CD28P10747 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 MAPK10-270ENST00000641102 3538 ntBASIC4.98□□□□□ -1.61
CD28P10747 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD28P10747 CLCA3P-203ENST00000490028 2781 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms