Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.9□□□□□ -1.31
CHRNA1P02708 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.9□□□□□ -1.31
CHRNA1P02708 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
CHRNA1P02708 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.9□□□□□ -1.31
CHRNA1P02708 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CHRNA1P02708 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHRNA1P02708 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
CHRNA1P02708 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CHRNA1P02708 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
CHRNA1P02708 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.89□□□□□ -1.31
CHRNA1P02708 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.89□□□□□ -1.31
CHRNA1P02708 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.89□□□□□ -1.31
CHRNA1P02708 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.89□□□□□ -1.31
CHRNA1P02708 AC106800.3-201ENST00000511389 308 ntBASIC6.89□□□□□ -1.31
CHRNA1P02708 PRMT5P1-201ENST00000514351 598 ntBASIC6.89□□□□□ -1.31
CHRNA1P02708 CR383658.1-201ENST00000514609 734 ntBASIC6.89□□□□□ -1.31
CHRNA1P02708 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.89□□□□□ -1.31
CHRNA1P02708 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.89□□□□□ -1.31
CHRNA1P02708 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.89□□□□□ -1.31
CHRNA1P02708 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.89□□□□□ -1.31
CHRNA1P02708 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.89□□□□□ -1.31
CHRNA1P02708 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.89□□□□□ -1.31
CHRNA1P02708 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.89□□□□□ -1.31
CHRNA1P02708 AC063952.1-203ENST00000634410 658 ntBASIC6.89□□□□□ -1.31
CHRNA1P02708 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CHRNA1P02708 KARSP1-201ENST00000451871 1752 ntBASIC6.89□□□□□ -1.31
CHRNA1P02708 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CHRNA1P02708 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
CHRNA1P02708 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.89□□□□□ -1.31
CHRNA1P02708 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
CHRNA1P02708 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.89□□□□□ -1.31
CHRNA1P02708 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHRNA1P02708 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHRNA1P02708 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CHRNA1P02708 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHRNA1P02708 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
CHRNA1P02708 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.88□□□□□ -1.31
CHRNA1P02708 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CHRNA1P02708 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.88□□□□□ -1.31
CHRNA1P02708 CASC19-238ENST00000641523 1558 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHRNA1P02708 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.88□□□□□ -1.31
CHRNA1P02708 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHRNA1P02708 RNA5SP273-201ENST00000362484 113 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 RNU1-49P-201ENST00000363468 159 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 RNA5SP510-201ENST00000364697 99 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
CHRNA1P02708 AL031985.1-201ENST00000392713 418 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.88□□□□□ -1.31
CHRNA1P02708 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.88□□□□□ -1.31
CHRNA1P02708 AC242426.1-201ENST00000435270 960 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.88□□□□□ -1.31
CHRNA1P02708 AL391987.1-201ENST00000441025 200 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.88□□□□□ -1.31
CHRNA1P02708 MORF4-201ENST00000447135 971 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AC002553.3-201ENST00000453002 341 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 RN7SL101P-201ENST00000496350 279 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.88□□□□□ -1.31
CHRNA1P02708 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AP001858.2-201ENST00000536213 601 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AC068305.2-201ENST00000550567 1205 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AC007956.1-201ENST00000555623 542 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.88□□□□□ -1.31
CHRNA1P02708 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.88□□□□□ -1.31
CHRNA1P02708 AC015818.6-201ENST00000584274 634 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.88□□□□□ -1.31
CHRNA1P02708 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.88□□□□□ -1.31
CHRNA1P02708 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.88□□□□□ -1.31
CHRNA1P02708 AC129778.1-202ENST00000623812 261 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AL591379.1-207ENST00000635982 261 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.88□□□□□ -1.31
CHRNA1P02708 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.88□□□□□ -1.31
CHRNA1P02708 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CHRNA1P02708 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHRNA1P02708 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHRNA1P02708 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CHRNA1P02708 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC005332.9-201ENST00000620266 2921 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.87□□□□□ -1.31
CHRNA1P02708 AC008627.1-201ENST00000517511 1704 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHRNA1P02708 CYP2G2P-201ENST00000594920 1485 ntBASIC6.87□□□□□ -1.31
CHRNA1P02708 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms