Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 AC012254.3-201ENST00000591183 2117 ntBASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 OR3A2-201ENST00000408891 1076 ntBASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 AC245884.2-201ENST00000426257 404 ntBASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 NDUFB5P1-201ENST00000508134 564 ntBASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 RNA5SP400-201ENST00000517155 111 ntBASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 IGHV1-14-201ENST00000523391 241 ntBASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 ZNF322P1-201ENST00000568013 1209 ntBASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SHANK2Q9UPX8 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AC027088.4-201ENST00000611559 1947 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 RPS15AP30-201ENST00000420976 390 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 RPL36AP39-201ENST00000445859 318 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 MORF4L1P4-201ENST00000450245 976 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 RN7SL269P-201ENST00000467795 305 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AC093270.2-201ENST00000486157 792 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 RNA5SP34-201ENST00000516887 130 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AC020765.1-201ENST00000604296 328 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AC020978.8-201ENST00000571975 3022 ntBASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC9.19□□□□□ -0.94
SHANK2Q9UPX8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 PARP4P1-201ENST00000435945 2337 ntBASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 MAPK10-261ENST00000641050 3109 ntBASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 MIR433-201ENST00000384837 93 ntBASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 AC093155.2-201ENST00000420734 937 ntBASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 PTMAP6-201ENST00000439110 327 ntBASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 AC096861.1-201ENST00000616652 240 ntBASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.18□□□□□ -0.94
SHANK2Q9UPX8 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms