Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 CDY11P-201ENST00000447168 1651 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AL132640.2-201ENST00000559968 1698 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC111188.2-201ENST00000529697 1387 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 OR51A10P-201ENST00000307165 937 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 RN7SKP174-201ENST00000363803 330 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC024937.2-201ENST00000411669 1242 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 ELOCP17-201ENST00000414751 326 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC011233.1-201ENST00000422812 283 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC073900.1-201ENST00000429766 776 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC124944.2-201ENST00000429866 1242 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC129850.1-201ENST00000436203 508 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC068135.1-201ENST00000446164 246 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 RPS4XP19-201ENST00000460237 736 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 SRRM1P2-201ENST00000464531 1192 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 PABPC1P10-201ENST00000464731 381 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 RPL7AP30-201ENST00000482859 796 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 PFN1P8-201ENST00000497012 543 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 RNU6-1334P-201ENST00000516032 105 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 RNA5SP303-201ENST00000516192 130 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC023080.1-201ENST00000551663 931 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC021483.2-201ENST00000567415 758 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AL121834.1-201ENST00000572284 509 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC008759.1-201ENST00000589783 983 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AL512430.4-201ENST00000603085 613 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AP001981.2-201ENST00000603241 418 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC093765.1-201ENST00000603758 881 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC018755.4-201ENST00000619715 454 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC019080.5-201ENST00000624891 757 ntBASIC7.9□□□□□ -1.14
CNTN3Q9P232 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CNTN3Q9P232 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.9□□□□□ -1.14
CNTN3Q9P232 AC006600.2-201ENST00000624834 2506 ntBASIC7.9□□□□□ -1.15
CNTN3Q9P232 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CNTN3Q9P232 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CNTN3Q9P232 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
CNTN3Q9P232 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CNTN3Q9P232 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CNTN3Q9P232 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CNTN3Q9P232 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CNTN3Q9P232 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
CNTN3Q9P232 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC023886.2-201ENST00000321285 411 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 RNA5SP355-201ENST00000365317 135 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CNTN3Q9P232 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 CNN3P1-201ENST00000401596 935 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 ATF1P1-201ENST00000406040 927 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL117344.1-201ENST00000407196 616 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL590084.1-201ENST00000407885 387 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AL139135.1-201ENST00000412675 209 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC098592.2-201ENST00000413158 265 ntBASIC7.89□□□□□ -1.15
CNTN3Q9P232 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.89□□□□□ -1.15
CNTN3Q9P232 PPIAP23-201ENST00000420099 497 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms