Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC074029.2-201ENST00000551045 634 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC027176.2-201ENST00000559166 746 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC002519.2-203ENST00000567043 837 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 MIR4502-201ENST00000580432 81 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC079315.1-201ENST00000602952 623 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC116631.1-202ENST00000640984 683 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 MTND4P9-201ENST00000507819 1346 ntBASIC7.43□□□□□ -1.22
VTA1Q9NP79 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VTA1Q9NP79 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.43□□□□□ -1.22
VTA1Q9NP79 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC093278.2-201ENST00000564956 2485 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 RNA5SP433-201ENST00000364491 114 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 RNU6-152P-201ENST00000384037 107 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 MTND6P32-201ENST00000457611 483 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC131392.1-201ENST00000506490 633 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC087360.1-201ENST00000518788 616 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC005632.2-201ENST00000564271 828 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC027281.1-201ENST00000574178 758 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AL391834.1-201ENST00000609609 560 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 MIR6811-201ENST00000620409 58 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC120057.5-201ENST00000623840 154 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC087269.2-201ENST00000641764 975 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 CUL4AP1-201ENST00000514750 1863 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
VTA1Q9NP79 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 OR52B5P-204ENST00000641744 3467 ntBASIC7.42□□□□□ -1.22
VTA1Q9NP79 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
VTA1Q9NP79 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AL513548.1-201ENST00000562904 1724 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AL353625.1-202ENST00000366273 571 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AL049697.3-201ENST00000406493 982 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 RN7SKP240-201ENST00000410583 375 ntBASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.41□□□□□ -1.22
VTA1Q9NP79 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms