Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DNAJA1P5-201ENST00000440278 943 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 RN7SL326P-201ENST00000477493 296 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 IGKV1D-22-201ENST00000518953 324 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 OR4A40P-201ENST00000533878 948 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 CYCSP38-201ENST00000559840 322 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 AL138895.2-201ENST00000603019 178 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 AC011815.2-201ENST00000618230 2021 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 EPS15P1-202ENST00000459691 2071 ntBASIC5.61□□□□□ -1.51
KIAA1549Q9HCM3 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 SNORD16-201ENST00000362803 99 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 RNA5SP433-201ENST00000364491 114 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AL445238.1-204ENST00000400311 463 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AL096800.1-201ENST00000405326 893 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 VPS25P1-201ENST00000455691 508 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC108103.1-201ENST00000511286 446 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 MIR4301-201ENST00000577203 66 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC027575.3-201ENST00000583058 2747 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 RNA5SP500-201ENST00000364486 119 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AL096711.1-201ENST00000404780 554 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 NMD3P2-201ENST00000421815 761 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AL157884.1-201ENST00000424561 454 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 EIF3EP1-201ENST00000433978 1316 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 FABP5P2-201ENST00000439042 408 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 OR2L9P-201ENST00000444456 913 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 PPIAP7-201ENST00000454070 489 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC073594.1-201ENST00000462065 364 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AP000620.1-201ENST00000527147 504 ntBASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.6□□□□□ -1.51
KIAA1549Q9HCM3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms