Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 OR8G3P-201ENST00000533406 921 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 AL359513.1-201ENST00000614364 557 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 AL049634.1-201ENST00000453770 1720 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 ERG-205ENST00000398910 4954 ntTSL 5 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 RNU105B-201ENST00000364478 208 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 AL713922.1-201ENST00000416477 747 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 RPL21P133-201ENST00000443666 476 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 OR2AO1P-201ENST00000476497 403 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC10.1□□□□□ -0.79
IFT140Q96RY7 MIR8080-201ENST00000622224 89 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 AC025470.1-201ENST00000510053 2032 ntBASIC10.1□□□□□ -0.79
IFT140Q96RY7 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
IFT140Q96RY7 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
IFT140Q96RY7 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
IFT140Q96RY7 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
IFT140Q96RY7 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC10.09□□□□□ -0.79
IFT140Q96RY7 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
IFT140Q96RY7 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 AL050335.1-201ENST00000396909 869 ntBASIC10.09□□□□□ -0.79
IFT140Q96RY7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 AC022215.1-201ENST00000481770 362 ntBASIC10.09□□□□□ -0.79
IFT140Q96RY7 SUMO2P7-201ENST00000511179 285 ntBASIC10.09□□□□□ -0.79
IFT140Q96RY7 NRBF2P4-201ENST00000520874 850 ntBASIC10.09□□□□□ -0.79
IFT140Q96RY7 AC096996.1-201ENST00000563813 325 ntBASIC10.09□□□□□ -0.79
IFT140Q96RY7 AC141002.1-201ENST00000607025 279 ntBASIC10.09□□□□□ -0.79
IFT140Q96RY7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.09□□□□□ -0.79
IFT140Q96RY7 AC005332.9-201ENST00000620266 2921 ntBASIC10.09□□□□□ -0.79
IFT140Q96RY7 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
IFT140Q96RY7 AL139805.2-201ENST00000455305 2433 ntBASIC10.09□□□□□ -0.79
IFT140Q96RY7 SPATA31B1P-201ENST00000434692 4016 ntBASIC10.08□□□□□ -0.8
IFT140Q96RY7 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 CASC19-248ENST00000641674 1356 ntBASIC10.08□□□□□ -0.8
IFT140Q96RY7 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AL022331.1-201ENST00000429025 477 ntBASIC10.08□□□□□ -0.8
IFT140Q96RY7 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AC100832.1-201ENST00000471945 383 ntBASIC10.08□□□□□ -0.8
IFT140Q96RY7 AL049872.1-201ENST00000556323 322 ntBASIC10.08□□□□□ -0.8
IFT140Q96RY7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 AC020978.8-201ENST00000571975 3022 ntBASIC10.08□□□□□ -0.8
IFT140Q96RY7 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
IFT140Q96RY7 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC10.08□□□□□ -0.8
IFT140Q96RY7 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IFT140Q96RY7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IFT140Q96RY7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IFT140Q96RY7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IFT140Q96RY7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
IFT140Q96RY7 GUCY1B2-204ENST00000531898 1979 ntBASIC10.07□□□□□ -0.8
IFT140Q96RY7 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
IFT140Q96RY7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC10.07□□□□□ -0.8
IFT140Q96RY7 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC10.07□□□□□ -0.8
IFT140Q96RY7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
IFT140Q96RY7 EEF1A1P29-201ENST00000416082 1096 ntBASIC10.07□□□□□ -0.8
IFT140Q96RY7 IGKV1OR10-1-201ENST00000442306 329 ntBASIC10.07□□□□□ -0.8
IFT140Q96RY7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC10.07□□□□□ -0.8
IFT140Q96RY7 RPL7AP6-201ENST00000477943 801 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms