Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC009831.5-201ENST00000624000 3189 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 RNA5SP514-201ENST00000363717 111 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 RNU1-84P-201ENST00000365447 164 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 VIM2P-201ENST00000402383 1294 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 RN7SKP221-201ENST00000410420 301 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 U3.43-201ENST00000410734 213 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 GPN3P1-201ENST00000423883 535 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 RN7SL612P-201ENST00000497704 295 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC093664.1-201ENST00000511779 289 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC068726.1-201ENST00000610993 341 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 AC007603.3-201ENST00000636915 979 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.99□□□□□ -1.45
COL21A1Q96P44 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 AL353763.1-201ENST00000624467 1628 ntBASIC5.99□□□□□ -1.45
COL21A1Q96P44 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL21A1Q96P44 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 AL391419.1-201ENST00000398901 1275 ntBASIC5.98□□□□□ -1.45
COL21A1Q96P44 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 Z82198.3-201ENST00000421145 199 ntBASIC5.98□□□□□ -1.45
COL21A1Q96P44 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 OR6R1P-201ENST00000431838 940 ntBASIC5.98□□□□□ -1.45
COL21A1Q96P44 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 PPP1R11P1-201ENST00000486095 376 ntBASIC5.98□□□□□ -1.45
COL21A1Q96P44 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 AC114728.1-201ENST00000488289 483 ntBASIC5.98□□□□□ -1.45
COL21A1Q96P44 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 IGKV1D-22-201ENST00000518953 324 ntBASIC5.98□□□□□ -1.45
COL21A1Q96P44 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 AC133552.4-201ENST00000576103 676 ntBASIC5.98□□□□□ -1.45
COL21A1Q96P44 MIR3157-201ENST00000578688 85 ntBASIC5.98□□□□□ -1.45
COL21A1Q96P44 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL21A1Q96P44 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
COL21A1Q96P44 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 AL731532.1-201ENST00000623972 4236 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.97□□□□□ -1.45
COL21A1Q96P44 CDY3P-201ENST00000454543 1618 ntBASIC5.97□□□□□ -1.45
COL21A1Q96P44 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL21A1Q96P44 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms