Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM5Q96HC4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC093909.5-201ENST00000621839 1799 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RN7SKP237-201ENST00000364663 301 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RN7SKP129-201ENST00000410288 299 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RPL23AP18-201ENST00000416139 468 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RPL21P50-201ENST00000417698 477 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RPS17P17-201ENST00000419392 409 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 SETP9-201ENST00000423837 832 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RPL34P27-201ENST00000428810 349 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC128677.1-201ENST00000436016 442 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 NPM1P23-201ENST00000440193 849 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 MORF4-201ENST00000447135 971 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AL034369.1-201ENST00000453808 477 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 VPS25P1-201ENST00000455691 508 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RN7SL221P-201ENST00000466190 281 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 EIF4E2P2-201ENST00000492033 736 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC093325.1-201ENST00000508378 326 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC093664.1-201ENST00000511779 289 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC093816.1-201ENST00000515076 913 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RNU4-18P-201ENST00000516751 149 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 OR4A40P-201ENST00000533878 948 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC010547.7-201ENST00000570323 333 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC005332.4-201ENST00000592752 579 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 MIR6503-201ENST00000622884 86 ntBASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM5Q96HC4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
PDLIM5Q96HC4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDLIM5Q96HC4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDLIM5Q96HC4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDLIM5Q96HC4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.21□□□□□ -1.41
PDLIM5Q96HC4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AL451046.1-201ENST00000406097 534 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AC007562.1-201ENST00000421819 517 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 OR6R1P-201ENST00000431838 940 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AL022324.2-201ENST00000434827 780 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 MTCO3P17-201ENST00000443775 513 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AC023274.2-201ENST00000445264 521 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 RPS27AP3-201ENST00000453803 454 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 RPS4XP17-201ENST00000479057 754 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AC005017.1-201ENST00000482002 490 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AC114728.1-201ENST00000488289 483 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AOX3P-204ENST00000491025 2107 ntBASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.21□□□□□ -1.42
PDLIM5Q96HC4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms