Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AC010624.4-201ENST00000597606 1351 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 MIR188-201ENST00000385034 86 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 GAPDHP59-201ENST00000435908 267 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AC118758.1-202ENST00000454719 225 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 RN7SL362P-201ENST00000494228 267 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 RNA5SP473-201ENST00000516402 125 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AC009729.1-201ENST00000548873 1133 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AL078601.3-201ENST00000573303 535 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AC090616.1-201ENST00000583895 447 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AL135999.3-201ENST00000610501 812 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 MIR7109-201ENST00000613748 65 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 MIR6721-201ENST00000617181 87 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 AL132640.3-201ENST00000630473 177 ntBASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FNDC9Q8TBE3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
FNDC9Q8TBE3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.71□□□□□ -1.49
FNDC9Q8TBE3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FNDC9Q8TBE3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FNDC9Q8TBE3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
FNDC9Q8TBE3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
FNDC9Q8TBE3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
FNDC9Q8TBE3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AC006213.6-201ENST00000623722 4179 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 FAM32BP-201ENST00000344033 333 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 RNA5SP188-201ENST00000362916 129 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 RNU1-65P-201ENST00000363919 148 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 SNORA70H-201ENST00000383910 135 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 SNORA70J-201ENST00000384182 135 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 RNA5SP198-201ENST00000410376 127 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AC099782.1-201ENST00000425889 474 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 OR52E7P-201ENST00000452394 933 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 OR9A1P-202ENST00000484361 945 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 Vault.2-201ENST00000516519 98 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 RNA5SP206-201ENST00000516703 121 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AC107958.1-201ENST00000556576 290 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 OR1E3-201ENST00000575608 948 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 uc_338.31-201ENST00000615595 186 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AL591926.1-201ENST00000620542 217 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 CASC19-274ENST00000642018 970 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 AL355377.1-201ENST00000621125 1653 ntBASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FNDC9Q8TBE3 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms